org.rcsb.cif.schema.mm.PdbxStructLink Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the PDBX_STRUCT_LINK category record details about
* covalent linkages in the structure.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxStructLink extends DelegatingCategory {
public PdbxStructLink(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "id":
return getId();
case "type":
return getType();
case "ptnr1_label_alt_id":
return getPtnr1LabelAltId();
case "ptnr1_label_asym_id":
return getPtnr1LabelAsymId();
case "ptnr1_label_atom_id":
return getPtnr1LabelAtomId();
case "ptnr1_label_comp_id":
return getPtnr1LabelCompId();
case "ptnr1_label_seq_id":
return getPtnr1LabelSeqId();
case "ptnr1_label_ins_code":
return getPtnr1LabelInsCode();
case "ptnr1_symmetry":
return getPtnr1Symmetry();
case "ptnr2_label_alt_id":
return getPtnr2LabelAltId();
case "ptnr2_label_asym_id":
return getPtnr2LabelAsymId();
case "ptnr2_label_atom_id":
return getPtnr2LabelAtomId();
case "ptnr2_label_comp_id":
return getPtnr2LabelCompId();
case "ptnr2_label_seq_id":
return getPtnr2LabelSeqId();
case "ptnr2_label_ins_code":
return getPtnr2LabelInsCode();
case "ptnr2_symmetry":
return getPtnr2Symmetry();
case "details":
return getDetails();
case "pdbx_dist_value":
return getPdbxDistValue();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of _pdbx_struct_link.id must uniquely identify a record in
* the PDBX_STRUCT_LINK list.
* @return StrColumn
*/
public StrColumn getId() {
return delegate.getColumn("id", DelegatingStrColumn::new);
}
/**
* The chemical or structural type of the interaction.
* @return StrColumn
*/
public StrColumn getType() {
return delegate.getColumn("type", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
* @return StrColumn
*/
public StrColumn getPtnr1LabelAltId() {
return delegate.getColumn("ptnr1_label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelAsymId() {
return delegate.getColumn("ptnr1_label_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelAtomId() {
return delegate.getColumn("ptnr1_label_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr1LabelCompId() {
return delegate.getColumn("ptnr1_label_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPtnr1LabelSeqId() {
return delegate.getColumn("ptnr1_label_seq_id", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 1 of the structure
* connection.
* @return StrColumn
*/
public StrColumn getPtnr1LabelInsCode() {
return delegate.getColumn("ptnr1_label_ins_code", DelegatingStrColumn::new);
}
/**
* Describes the symmetry operation that should be applied to the
* atom set specified by _pdbx_struct_link.ptnr1_label* to generate the
* first partner in the structure connection.
* @return StrColumn
*/
public StrColumn getPtnr1Symmetry() {
return delegate.getColumn("ptnr1_symmetry", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_sites_alt.id in the
* ATOM_SITES_ALT category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelAltId() {
return delegate.getColumn("ptnr2_label_alt_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelAsymId() {
return delegate.getColumn("ptnr2_label_asym_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelAtomId() {
return delegate.getColumn("ptnr2_label_atom_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getPtnr2LabelCompId() {
return delegate.getColumn("ptnr2_label_comp_id", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getPtnr2LabelSeqId() {
return delegate.getColumn("ptnr2_label_seq_id", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 2 of the structure
* connection.
* @return StrColumn
*/
public StrColumn getPtnr2LabelInsCode() {
return delegate.getColumn("ptnr2_label_ins_code", DelegatingStrColumn::new);
}
/**
* Describes the symmetry operation that should be applied to the
* atom set specified by _pdbx_struct_link.ptnr2_label* to generate the
* second partner in the structure connection.
* @return StrColumn
*/
public StrColumn getPtnr2Symmetry() {
return delegate.getColumn("ptnr2_symmetry", DelegatingStrColumn::new);
}
/**
* Text description of the linkage.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* The linkage distance in angstroms.
* @return FloatColumn
*/
public FloatColumn getPdbxDistValue() {
return delegate.getColumn("pdbx_dist_value", DelegatingFloatColumn::new);
}
}