org.rcsb.cif.schema.mm.PdbxValContact Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* The PDBX_VAL_CONTACT category lists non-bonded atoms within the
* assymetric unit of the entry that are in close contact.
*
* For those contacts not involving hydrogen a limit of
* 2.2 angstroms is used. For contacts involving a hydrogen atom
* a cutoff of 1.6 angstroms is used.
*
* This is a completely derived category. Do not edit.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxValContact extends DelegatingCategory {
public PdbxValContact(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "id":
return getId();
case "model_id":
return getModelId();
case "auth_asym_id_1":
return getAuthAsymId1();
case "auth_atom_id_1":
return getAuthAtomId1();
case "auth_comp_id_1":
return getAuthCompId1();
case "auth_seq_id_1":
return getAuthSeqId1();
case "auth_atom_id_2":
return getAuthAtomId2();
case "auth_asym_id_2":
return getAuthAsymId2();
case "auth_comp_id_2":
return getAuthCompId2();
case "auth_seq_id_2":
return getAuthSeqId2();
case "auth_PDB_insert_id_1":
return getAuthPDBInsertId1();
case "auth_PDB_insert_id_2":
return getAuthPDBInsertId2();
case "label_alt_id_1":
return getLabelAltId1();
case "label_asym_id_1":
return getLabelAsymId1();
case "label_atom_id_1":
return getLabelAtomId1();
case "label_comp_id_1":
return getLabelCompId1();
case "label_seq_id_1":
return getLabelSeqId1();
case "label_alt_id_2":
return getLabelAltId2();
case "label_asym_id_2":
return getLabelAsymId2();
case "label_atom_id_2":
return getLabelAtomId2();
case "label_comp_id_2":
return getLabelCompId2();
case "label_seq_id_2":
return getLabelSeqId2();
case "dist":
return getDist();
default:
return new DelegatingColumn(column);
}
}
/**
* The value of _pdbx_val_contact.id must uniquely identify
* each item in the PDBX_VAL_CONTACT list.
* This is an integer serial number.
* @return IntColumn
*/
public IntColumn getId() {
return delegate.getColumn("id", DelegatingIntColumn::new);
}
/**
* The model number for the given angle
* @return IntColumn
*/
public IntColumn getModelId() {
return delegate.getColumn("model_id", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAsymId1() {
return delegate.getColumn("auth_asym_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAtomId1() {
return delegate.getColumn("auth_atom_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthCompId1() {
return delegate.getColumn("auth_comp_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthSeqId1() {
return delegate.getColumn("auth_seq_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_atom_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAtomId2() {
return delegate.getColumn("auth_atom_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthAsymId2() {
return delegate.getColumn("auth_asym_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthCompId2() {
return delegate.getColumn("auth_comp_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.auth_seq_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthSeqId2() {
return delegate.getColumn("auth_seq_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthPDBInsertId1() {
return delegate.getColumn("auth_PDB_insert_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getAuthPDBInsertId2() {
return delegate.getColumn("auth_PDB_insert_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_alt_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAltId1() {
return delegate.getColumn("label_alt_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAsymId1() {
return delegate.getColumn("label_asym_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getLabelAtomId1() {
return delegate.getColumn("label_atom_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelCompId1() {
return delegate.getColumn("label_comp_id_1", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 1 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getLabelSeqId1() {
return delegate.getColumn("label_seq_id_1", DelegatingIntColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_alt_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAltId2() {
return delegate.getColumn("label_alt_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_asym_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelAsymId2() {
return delegate.getColumn("label_asym_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _chem_comp_atom.atom_id in the
* CHEM_COMP_ATOM category.
* @return StrColumn
*/
public StrColumn getLabelAtomId2() {
return delegate.getColumn("label_atom_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_comp_id in the
* ATOM_SITE category.
* @return StrColumn
*/
public StrColumn getLabelCompId2() {
return delegate.getColumn("label_comp_id_2", DelegatingStrColumn::new);
}
/**
* A component of the identifier for partner 2 of the close
* contact.
*
* This data item is a pointer to _atom_site.label_seq_id in the
* ATOM_SITE category.
* @return IntColumn
*/
public IntColumn getLabelSeqId2() {
return delegate.getColumn("label_seq_id_2", DelegatingIntColumn::new);
}
/**
* The value of the close contact for the two atoms defined.
* @return FloatColumn
*/
public FloatColumn getDist() {
return delegate.getColumn("dist", DelegatingFloatColumn::new);
}
}