org.rcsb.cif.schema.mm.PdbxValidatePeptideOmega Maven / Gradle / Ivy

package org.rcsb.cif.schema.mm;

import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;

import javax.annotation.Generated;

/**
 * Data items in the PDBX_VALIDATE_PEPTIDE_OMEGA category list the
 * residues that contain peptide bonds deviate
 * significantly from both cis and trans conformation.
 * cis bonds, if any, are listed on cispep records.
 * trans is defined as 180 +/- 30 and
 * cis is defined as 0 +/- 30 degrees.
 */
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class PdbxValidatePeptideOmega extends DelegatingCategory {
    public PdbxValidatePeptideOmega(Category delegate) {
        super(delegate);
    }

    @Override
    protected Column createDelegate(String columnName, Column column) {
        switch (columnName) {
            case "id":
                return getId();
            case "PDB_model_num":
                return getPDBModelNum();
            case "auth_asym_id_1":
                return getAuthAsymId1();
            case "auth_asym_id_2":
                return getAuthAsymId2();
            case "auth_comp_id_1":
                return getAuthCompId1();
            case "auth_comp_id_2":
                return getAuthCompId2();
            case "auth_seq_id_1":
                return getAuthSeqId1();
            case "auth_seq_id_2":
                return getAuthSeqId2();
            case "PDB_ins_code_1":
                return getPDBInsCode1();
            case "PDB_ins_code_2":
                return getPDBInsCode2();
            case "label_alt_id_1":
                return getLabelAltId1();
            case "label_alt_id_2":
                return getLabelAltId2();
            case "omega":
                return getOmega();
            default:
                return new DelegatingColumn(column);
        }
    }

    /**
     * The value of _pdbx_validate_peptide_omega.id must
     * uniquely identify each item in the PDBX_VALIDATE_PEPTIDE_OMEGA list.
     * This is an integer serial number.
     * @return IntColumn
     */
    public IntColumn getId() {
        return delegate.getColumn("id", DelegatingIntColumn::new);
    }

    /**
     * The model number for the given residue
     * 
     * This data item is a pointer to _atom_site.pdbx_PDB_model_num in the
     * ATOM_SITE category.
     * @return IntColumn
     */
    public IntColumn getPDBModelNum() {
        return delegate.getColumn("PDB_model_num", DelegatingIntColumn::new);
    }

    /**
     * Part of the identifier of the first residue in the bond
     * 
     * This data item is a pointer to _atom_site.auth_asym_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getAuthAsymId1() {
        return delegate.getColumn("auth_asym_id_1", DelegatingStrColumn::new);
    }

    /**
     * Part of the identifier of the second residue in the bond
     * 
     * This data item is a pointer to _atom_site.auth_asym_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getAuthAsymId2() {
        return delegate.getColumn("auth_asym_id_2", DelegatingStrColumn::new);
    }

    /**
     * Part of the identifier of the first residue in the bond
     * 
     * This data item is a pointer to _atom_site.auth_comp_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getAuthCompId1() {
        return delegate.getColumn("auth_comp_id_1", DelegatingStrColumn::new);
    }

    /**
     * Part of the identifier of the second residue in the bond
     * 
     * This data item is a pointer to _atom_site.auth_comp_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getAuthCompId2() {
        return delegate.getColumn("auth_comp_id_2", DelegatingStrColumn::new);
    }

    /**
     * Part of the identifier of the first residue in the bond
     * 
     * This data item is a pointer to _atom_site.auth_seq_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getAuthSeqId1() {
        return delegate.getColumn("auth_seq_id_1", DelegatingStrColumn::new);
    }

    /**
     * Part of the identifier of the second residue in the bond
     * 
     * This data item is a pointer to _atom_site.auth_seq_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getAuthSeqId2() {
        return delegate.getColumn("auth_seq_id_2", DelegatingStrColumn::new);
    }

    /**
     * Optional identifier of the first residue in the bond
     * 
     * This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getPDBInsCode1() {
        return delegate.getColumn("PDB_ins_code_1", DelegatingStrColumn::new);
    }

    /**
     * Optional identifier of the second residue in the bond
     * 
     * This data item is a pointer to _atom_site.pdbx_PDB_ins_code in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getPDBInsCode2() {
        return delegate.getColumn("PDB_ins_code_2", DelegatingStrColumn::new);
    }

    /**
     * Optional identifier of the first residue in the torsion angle
     * 
     * This data item is a pointer to _atom_site.label_alt_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getLabelAltId1() {
        return delegate.getColumn("label_alt_id_1", DelegatingStrColumn::new);
    }

    /**
     * Optional identifier of the second residue in the torsion angle
     * This data item is a pointer to _atom_site.label_alt_id in the
     * ATOM_SITE category.
     * @return StrColumn
     */
    public StrColumn getLabelAltId2() {
        return delegate.getColumn("label_alt_id_2", DelegatingStrColumn::new);
    }

    /**
     * The value of the OMEGA angle for the peptide linkage between
     * the two defined residues
     * @return FloatColumn
     */
    public FloatColumn getOmega() {
        return delegate.getColumn("omega", DelegatingFloatColumn::new);
    }

}