org.rcsb.cif.schema.mm.StructBiolView Maven / Gradle / Ivy
package org.rcsb.cif.schema.mm;
import org.rcsb.cif.model.*;
import org.rcsb.cif.schema.*;
import javax.annotation.Generated;
/**
* Data items in the STRUCT_BIOL_VIEW category record details
* about how to draw and annotate an informative view of the
* biological structure.
*/
@Generated("org.rcsb.cif.schema.generator.SchemaGenerator")
public class StructBiolView extends DelegatingCategory {
public StructBiolView(Category delegate) {
super(delegate);
}
@Override
protected Column createDelegate(String columnName, Column column) {
switch (columnName) {
case "biol_id":
return getBiolId();
case "details":
return getDetails();
case "id":
return getId();
case "rot_matrix[1][1]":
return getRotMatrix11();
case "rot_matrix[1][2]":
return getRotMatrix12();
case "rot_matrix[1][3]":
return getRotMatrix13();
case "rot_matrix[2][1]":
return getRotMatrix21();
case "rot_matrix[2][2]":
return getRotMatrix22();
case "rot_matrix[2][3]":
return getRotMatrix23();
case "rot_matrix[3][1]":
return getRotMatrix31();
case "rot_matrix[3][2]":
return getRotMatrix32();
case "rot_matrix[3][3]":
return getRotMatrix33();
case "pdbx_vector[1]":
return getPdbxVector1();
case "pdbx_vector[2]":
return getPdbxVector2();
case "pdbx_vector[3]":
return getPdbxVector3();
default:
return new DelegatingColumn(column);
}
}
/**
* This data item is a pointer to _struct_biol.id in the STRUCT_BIOL
* category.
* @return StrColumn
*/
public StrColumn getBiolId() {
return delegate.getColumn("biol_id", DelegatingStrColumn::new);
}
/**
* A description of special aspects of this view of the biological
* structure.
*
* This data item can be used as a figure legend.
* @return StrColumn
*/
public StrColumn getDetails() {
return delegate.getColumn("details", DelegatingStrColumn::new);
}
/**
* The value of _struct_biol_view.id must uniquely identify a
* record in the STRUCT_BIOL_VIEW list.
*
* Note that this item need not be a number; it can be any unique
* identifier.
* @return StrColumn
*/
public StrColumn getId() {
return delegate.getColumn("id", DelegatingStrColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix11() {
return delegate.getColumn("rot_matrix[1][1]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix12() {
return delegate.getColumn("rot_matrix[1][2]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix13() {
return delegate.getColumn("rot_matrix[1][3]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix21() {
return delegate.getColumn("rot_matrix[2][1]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix22() {
return delegate.getColumn("rot_matrix[2][2]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix23() {
return delegate.getColumn("rot_matrix[2][3]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix31() {
return delegate.getColumn("rot_matrix[3][1]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix32() {
return delegate.getColumn("rot_matrix[3][2]", DelegatingFloatColumn::new);
}
/**
* The elements of the matrix used to rotate the subset of the
* Cartesian coordinates in the ATOM_SITE category identified in the
* STRUCT_BIOL_GEN category to give a view useful for describing the
* structure. The conventions used in the rotation are described in
* _struct_biol_view.details.
*
* |x'| |11 12 13| |x|
* |y'|~reoriented Cartesian~ = |21 22 23| |y|~Cartesian~
* |z'| |31 32 33| |z|
* @return FloatColumn
*/
public FloatColumn getRotMatrix33() {
return delegate.getColumn("rot_matrix[3][3]", DelegatingFloatColumn::new);
}
/**
* translation vector
* @return FloatColumn
*/
public FloatColumn getPdbxVector1() {
return delegate.getColumn("pdbx_vector[1]", DelegatingFloatColumn::new);
}
/**
* translation vector
* @return FloatColumn
*/
public FloatColumn getPdbxVector2() {
return delegate.getColumn("pdbx_vector[2]", DelegatingFloatColumn::new);
}
/**
* translation vector
* @return FloatColumn
*/
public FloatColumn getPdbxVector3() {
return delegate.getColumn("pdbx_vector[3]", DelegatingFloatColumn::new);
}
}