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• test14_flat_portsAndDefinitions.xml

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testFlattening.test14_flat_portsAndDefinitions.xml Maven / Gradle / Ivy

<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:comp="http://www.sbml.org/sbml/level3/version1/comp/version1" level="3" version="1" comp:required="true">
  <model>
    <listOfCompartments>
      <compartment id="C" spatialDimensions="3" size="10" constant="false"/>
      <compartment id="sub1__C" spatialDimensions="3" size="1" constant="false"/>
      <compartment id="sub2__C" spatialDimensions="3" size="1" constant="false"/>
      <compartment id="sub3__C" spatialDimensions="3" size="1" constant="false"/>
      <compartment id="sub3__sub1__C" spatialDimensions="3" size="1" constant="false"/>
      <compartment id="sub3__sub2__C" spatialDimensions="3" size="1" constant="false"/>
      <compartment id="sub3__sub2__sub1__C" spatialDimensions="3" size="1" constant="false"/>
    </listOfCompartments>
    <listOfSpecies>
      <species id="sub1__S1" compartment="sub1__C" initialConcentration="2.5" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species id="sub2__S1" compartment="sub2__C" initialAmount="9" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species id="S1" compartment="C" initialConcentration="2.5" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species id="sub3__S1" compartment="sub3__C" initialAmount="11" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species id="sub3__sub1__S1" compartment="sub3__sub1__C" initialConcentration="2.5" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      <species id="sub3__sub2__S1" compartment="sub3__sub2__C" initialAmount="9" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
    </listOfSpecies>
    <comp:listOfPorts>
      <comp:port comp:idRef="C" comp:id="C_port"/>
      <comp:port comp:idRef="sub3__sub2__sub1__C" comp:id="C2_port"/>
    </comp:listOfPorts>
  </model>
  <comp:listOfModelDefinitions>
    <comp:modelDefinition id="moddef1">
      <listOfCompartments>
        <compartment id="C" spatialDimensions="3" size="1" constant="false"/>
      </listOfCompartments>
      <listOfSpecies>
        <species id="S1" compartment="C" initialConcentration="2.5" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      </listOfSpecies>
    </comp:modelDefinition>
    <comp:modelDefinition id="moddef2">
      <listOfCompartments>
        <compartment id="C" spatialDimensions="3" size="1" constant="false"/>
      </listOfCompartments>
      <listOfSpecies>
        <species id="S1" compartment="C" initialAmount="9" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      </listOfSpecies>
      <comp:listOfSubmodels>
        <comp:submodel comp:id="sub1" comp:modelRef="moddef1"/>
      </comp:listOfSubmodels>
    </comp:modelDefinition>
    <comp:modelDefinition id="moddef3">
      <listOfCompartments>
        <compartment id="C" spatialDimensions="3" size="1" constant="false"/>
      </listOfCompartments>
      <listOfSpecies>
        <species id="S1" compartment="C" initialAmount="11" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"/>
      </listOfSpecies>
      <comp:listOfSubmodels>
        <comp:submodel comp:id="sub1" comp:modelRef="moddef1"/>
        <comp:submodel comp:id="sub2" comp:modelRef="moddef2"/>
      </comp:listOfSubmodels>
    </comp:modelDefinition>
  </comp:listOfModelDefinitions>
</sbml>