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 * Institute of Molecular Cell Biology and Genetics, University of
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package org.scijava.script;

import java.io.File;
import java.math.BigDecimal;
import java.math.BigInteger;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.Date;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.concurrent.Future;

import javax.script.ScriptException;

import org.scijava.Context;
import org.scijava.Gateway;
import org.scijava.InstantiableException;
import org.scijava.MenuPath;
import org.scijava.Priority;
import org.scijava.app.AppService;
import org.scijava.command.CommandService;
import org.scijava.log.LogService;
import org.scijava.module.Module;
import org.scijava.module.ModuleService;
import org.scijava.object.LazyObjects;
import org.scijava.parse.ParseService;
import org.scijava.plugin.AbstractSingletonService;
import org.scijava.plugin.Parameter;
import org.scijava.plugin.Plugin;
import org.scijava.plugin.PluginService;
import org.scijava.plugin.SciJavaPlugin;
import org.scijava.script.process.ScriptProcessorService;
import org.scijava.service.Service;
import org.scijava.util.ColorRGB;
import org.scijava.util.ColorRGBA;
import org.scijava.util.Types;

/**
 * Default service for working with scripts.
 * 
 * @author Johannes Schindelin
 * @author Curtis Rueden
 */
@Plugin(type = Service.class, priority = Priority.HIGH)
public class DefaultScriptService extends
	AbstractSingletonService implements ScriptService
{

	@Parameter
	private PluginService pluginService;

	@Parameter
	private ModuleService moduleService;

	@Parameter
	private CommandService commandService;

	@Parameter
	private AppService appService;

	@Parameter
	private ScriptProcessorService scriptProcessorService;

	@Parameter
	private ParseService parser;

	@Parameter
	private LogService log;

	/** Index of registered scripting languages. */
	private ScriptLanguageIndex scriptLanguageIndex;

	/** List of directories to scan for scripts. */
	private ArrayList scriptDirs;

	/** Menu prefix to use for each script directory, if any. */
	private HashMap menuPrefixes;

	/** Index of available scripts, by script path. */
	private HashMap scripts;

	/** Table of short type names to associated {@link Class}. */
	private HashMap> aliasMap;

	// -- ScriptService methods - scripting languages --

	@Override
	public ScriptLanguageIndex getIndex() {
		return scriptLanguageIndex();
	}

	// -- ScriptService methods - scripts --

	@Override
	public List getScriptDirectories() {
		return Collections.unmodifiableList(scriptDirs());
	}

	@Override
	public MenuPath getMenuPrefix(final File scriptDirectory) {
		return menuPrefixes().get(scriptDirectory);
	}

	@Override
	public void addScriptDirectory(final File scriptDirectory) {
		scriptDirs().add(scriptDirectory);
	}

	@Override
	public void addScriptDirectory(final File scriptDirectory,
		final MenuPath menuPrefix)
	{
		scriptDirs().add(scriptDirectory);
		menuPrefixes().put(scriptDirectory, menuPrefix);
	}

	@Override
	public void removeScriptDirectory(final File scriptDirectory) {
		scriptDirs().remove(scriptDirectory);
	}

	@Override
	public Collection getScripts() {
		return Collections.unmodifiableCollection(scripts().values());
	}

	@Override
	public ScriptInfo getScript(final File scriptFile) {
		return getOrCreate(scriptFile);
	}

	@Override
	public Future run(final File file, final boolean process,
		final Object... inputs)
	{
		return run(getOrCreate(file), process, inputs);
	}

	@Override
	public Future run(final File file, final boolean process,
		final Map inputMap)
	{
		return run(getOrCreate(file), process, inputMap);
	}

	@Override
	public Future run(final ScriptInfo info, final boolean process,
		final Object... inputs)
	{
		return cast(moduleService.run(info, process, inputs));
	}

	@Override
	public Future run(final ScriptInfo info, final boolean process,
		final Map inputMap)
	{
		return cast(moduleService.run(info, process, inputMap));
	}

	@Override
	public void addAlias(final String alias, final Class type) {
		aliasMap().put(alias, type);
	}

	@Override
	public synchronized Class lookupClass(final String alias)
		throws ScriptException
	{
		final String componentAlias = stripArrayNotation(alias);
		final Class type = aliasMap().get(componentAlias);
		if (type != null) {
			final int arrayDim = (alias.length() - componentAlias.length()) / 2;
			return Types.array(type, arrayDim);
		}

		try {
			final Class c = Types.load(alias, false);
			aliasMap().put(alias, c);
			return c;
		}
		catch (final IllegalArgumentException exc) {
			final ScriptException se = new ScriptException("Unknown type: " + alias);
			se.initCause(exc);
			throw se;
		}
	}

	// -- Service methods --

	@Override
	public void initialize() {
		super.initialize();

		// add scripts to the module index... only when needed!
		moduleService.getIndex().addLater(new LazyObjects() {

			@Override
			public Collection get() {
				return scripts().values();
			}

		});
	}

	// -- Helper methods - lazy initialization --

	/** Gets {@link #scriptLanguageIndex}, initializing if needed. */
	private ScriptLanguageIndex scriptLanguageIndex() {
		if (scriptLanguageIndex == null) initScriptLanguageIndex();
		return scriptLanguageIndex;
	}

	/** Gets {@link #scriptDirs}, initializing if needed. */
	private List scriptDirs() {
		if (scriptDirs == null) initScriptDirs();
		return scriptDirs;
	}

	/** Gets {@link #menuPrefixes}, initializing if needed. */
	private HashMap menuPrefixes() {
		if (menuPrefixes == null) initMenuPrefixes();
		return menuPrefixes;
	}

	/** Gets {@link #scripts}, initializing if needed. */
	private HashMap scripts() {
		if (scripts == null) initScripts();
		return scripts;
	}

	/** Gets {@link #aliasMap}, initializing if needed. */
	private HashMap> aliasMap() {
		if (aliasMap == null) initAliasMap();
		return aliasMap;
	}

	/** Initializes {@link #scriptLanguageIndex}. */
	private synchronized void initScriptLanguageIndex() {
		if (scriptLanguageIndex != null) return; // already initialized

		final ScriptLanguageIndex index = new ScriptLanguageIndex(log);

		// add ScriptLanguage plugins
		for (final ScriptLanguage language : getInstances()) {
			index.add(language, true);
		}

		scriptLanguageIndex = index;
	}

	/** Initializes {@link #scriptDirs}. */
	private synchronized void initScriptDirs() {
		if (scriptDirs != null) return;

		final ArrayList dirs = new ArrayList<>();

		// append default script directories
		final File baseDir = appService.getApp().getBaseDirectory();
		dirs.add(new File(baseDir, SCRIPTS_RESOURCE_DIR));

		// append additional script directories from system property
		final String scriptsPath = System.getProperty(SCRIPTS_PATH_PROPERTY);
		if (scriptsPath != null) {
			for (final String dir : scriptsPath.split(File.pathSeparator)) {
				dirs.add(new File(dir));
			}
		}

		scriptDirs = dirs;
	}

	/** Initializes {@link #menuPrefixes}. */
	private synchronized void initMenuPrefixes() {
		if (menuPrefixes != null) return;
		menuPrefixes = new HashMap<>();
	}

	/** Initializes {@link #scripts}. */
	private synchronized void initScripts() {
		if (scripts != null) return; // already initialized

		final HashMap map = new HashMap<>();

		final ArrayList scriptList = new ArrayList<>();
		new ScriptFinder(context()).findScripts(scriptList);

		for (final ScriptInfo info : scriptList) {
			map.put(info.getPath(), info);
		}

		scripts = map;
	}

	/** Initializes {@link #aliasMap}. */
	private synchronized void initAliasMap() {
		if (aliasMap != null) return; // already initialized

		final HashMap> map = new HashMap<>();

		// primitives
		addAliases(map, boolean.class, byte.class, char.class, double.class,
			float.class, int.class, long.class, short.class);

		// primitive wrappers
		addAliases(map, Boolean.class, Byte.class, Character.class, Double.class,
			Float.class, Integer.class, Long.class, Short.class);

		// built-in types
		addAliases(map, Context.class, BigDecimal.class, BigInteger.class,
			ColorRGB.class, ColorRGBA.class, Date.class, File.class, String.class);

		// service types
		addAliases(map, pluginClasses(Service.class));

		// gateway types
		addAliases(map, pluginClasses(Gateway.class));

		aliasMap = map;
	}

	// -- Helper methods - run --

	/**
	 * Gets a {@link ScriptInfo} for the given file, creating a new one if none
	 * are registered with the service.
	 */
	private ScriptInfo getOrCreate(final File file) {
		final ScriptInfo info = scripts().get(file);
		if (info != null) return info;
		return new ScriptInfo(getContext(), file);
	}

	@SuppressWarnings({ "rawtypes", "unchecked" })
	private Future cast(final Future future) {
		return (Future) future;
	}

	// -- Helper methods - aliases --

	private void addAliases(final HashMap> map,
		final Class... types)
	{
		for (final Class type : types) {
			addAlias(map, type);
		}
	}

	private void
		addAlias(final HashMap> map, final Class type)
	{
		if (type == null) return;
		map.put(type.getSimpleName(), type);
		// NB: Recursively add supertypes.
		addAlias(map, type.getSuperclass());
		addAliases(map, type.getInterfaces());
	}

	private Class[] pluginClasses(final Class type) {
		return pluginService.getPluginsOfType(type).stream().map(info -> {
			try {
				return info.loadClass();
			}
			catch (final InstantiableException exc) {
				log.warn("Invalid class: " + info.getClassName(), exc);
				return null;
			}
		}).toArray(Class[]::new);
	}

	private String stripArrayNotation(final String alias) {
		if (!alias.endsWith("[]")) return alias;
		return stripArrayNotation(alias.substring(0, alias.length() - 2));
	}
}




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