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SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.
/*
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* SciJava Common shared library for SciJava software.
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* Institute of Molecular Cell Biology and Genetics, University of
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package org.scijava.script;
import java.io.File;
import java.io.IOException;
import java.net.MalformedURLException;
import java.net.URL;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Set;
import org.scijava.AbstractContextual;
import org.scijava.Context;
import org.scijava.MenuPath;
import org.scijava.log.LogService;
import org.scijava.plugin.Parameter;
import org.scijava.util.FileUtils;
/**
* Discovers scripts.
*
* To accomplish this, we crawl the directories specified by
* {@link ScriptService#getScriptDirectories()}. By default, those directories
* include the {@code scripts} and {@code plugins/Scripts} folders off the
* SciJava application's base directory.
*
*
* @author Johannes Schindelin
* @author Curtis Rueden
*/
public class ScriptFinder extends AbstractContextual {
private static final String SCRIPT_ICON = "/icons/script_code.png";
@Parameter
private ScriptService scriptService;
@Parameter
private LogService log;
private final String pathPrefix;
/**
* Creates a new script finder.
*
* @param context The SciJava application context housing needed services.
*/
public ScriptFinder(final Context context) {
this(context, ScriptService.SCRIPTS_RESOURCE_DIR);
}
/**
* Creates a new script finder.
*
* @param context The SciJava application context housing needed services.
* @param pathPrefix the path prefix beneath which to scan classpath
* resources, or null to skip classpath scanning.
*/
public ScriptFinder(final Context context, final String pathPrefix) {
setContext(context);
this.pathPrefix = pathPrefix;
}
// -- ScriptFinder methods --
/**
* Discovers the scripts.
*
* @param scripts The collection to which the discovered scripts are added.
*/
public void findScripts(final List scripts) {
final List directories = scriptService.getScriptDirectories();
final Set urls = new HashSet<>();
int scriptCount = 0;
scriptCount += scanResources(scripts, urls);
// NB: We use a separate call to findResources for each directory so that
// we can distinguish which URLs came from each directory, because each
// directory may have a different menu prefix.
for (final File dir : directories) {
scriptCount += scanDirectory(scripts, urls, dir);
}
log.debug("Found " + scriptCount + " scripts");
}
// -- Helper methods --
/** Scans classpath resources for scripts (e.g., inside JAR files). */
private int scanResources(final List scripts, final Set urls) {
if (pathPrefix == null) return 0;
// NB: We leave the baseDirectory argument null, because scripts on disk
// will be picked up in the subsequent logic, which handles multiple
// script directories rather than being limited to a single one.
final Map scriptMap = //
FileUtils.findResources(null, pathPrefix, null);
return createInfos(scripts, urls, scriptMap, null);
}
/** Scans a directory for scripts. */
private int scanDirectory(final List scripts, final Set urls,
final File dir)
{
if (!dir.exists()) {
final String path = dir.getAbsolutePath();
log.debug("Ignoring non-existent scripts directory: " + path);
return 0;
}
final MenuPath menuPrefix = scriptService.getMenuPrefix(dir);
try {
final Set dirURL = Collections.singleton(dir.toURI().toURL());
final Map scriptMap = //
FileUtils.findResources(null, dirURL);
return createInfos(scripts, urls, scriptMap, menuPrefix);
}
catch (final MalformedURLException exc) {
log.error("Invalid script directory: " + dir, exc);
return 0;
}
}
private int createInfos(final List scripts, final Set urls,
final Map scriptMap, final MenuPath menuPrefix)
{
int scriptCount = 0;
for (final String path : scriptMap.keySet()) {
if (!scriptService.canHandleFile(path)) {
log.debug("Ignoring unsupported script: " + path);
continue;
}
final int dot = path.lastIndexOf('.');
final String basePath = dot <= 0 ? path : path.substring(0, dot);
final String friendlyPath = basePath.replace('_', ' ');
final MenuPath menuPath = new MenuPath(menuPrefix);
menuPath.addAll(new MenuPath(friendlyPath, "/", false));
// E.g.:
// path = "File/Import/Movie_File....groovy"
// basePath = "File/Import/Movie_File..."
// friendlyPath = "File/Import/Movie File..."
// menuPath = File > Import > Movie File...
// NB: Ignore base-level scripts (not nested in any menu).
if (menuPath.size() == 1) continue;
final URL url = scriptMap.get(path);
// NB: Skip scripts whose URLs have already been added.
if (urls.contains(url)) continue;
urls.add(url);
try {
final ScriptInfo info = new ScriptInfo(getContext(), url, path);
info.setMenuPath(menuPath);
// flag script with special icon
menuPath.getLeaf().setIconPath(SCRIPT_ICON);
scripts.add(info);
scriptCount++;
}
catch (final IOException exc) {
log.error("Invalid script URL: " + url, exc);
}
}
return scriptCount;
}
// -- Deprecated methods --
/** @deprecated Use {@link #ScriptFinder(Context)} instead. */
@Deprecated
public ScriptFinder(final ScriptService scriptService) {
this(scriptService.context());
}
}