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SciJava Common is a shared library for SciJava software. It provides a plugin framework, with an extensible mechanism for service discovery, backed by its own annotation processor, so that plugins can be loaded dynamically. It is used by downstream projects in the SciJava ecosystem, such as ImageJ and SCIFIO.

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/*
 * #%L
 * SciJava Common shared library for SciJava software.
 * %%
 * Copyright (C) 2009 - 2017 Board of Regents of the University of
 * Wisconsin-Madison, Broad Institute of MIT and Harvard, Max Planck
 * Institute of Molecular Cell Biology and Genetics, University of
 * Konstanz, and KNIME GmbH.
 * %%
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions are met:
 * 
 * 1. Redistributions of source code must retain the above copyright notice,
 *    this list of conditions and the following disclaimer.
 * 2. Redistributions in binary form must reproduce the above copyright notice,
 *    this list of conditions and the following disclaimer in the documentation
 *    and/or other materials provided with the distribution.
 * 
 * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
 * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
 * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
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 * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
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 */

package org.scijava.util;

import java.util.Collection;

/**
 * An extensible array of {@code double} elements.
 * 
 * @author Johannes Schindelin
 * @author Curtis Rueden
 */
public class DoubleArray extends AbstractPrimitiveArray {

	/** The backing array. */
	private double[] array;

	/**
	 * Constructs an extensible array of doubles, backed by a fixed-size array.
	 */
	public DoubleArray() {
		super(Double.TYPE);
	}

	/**
	 * Constructs an extensible array of doubles, backed by a fixed-size array.
	 * 
	 * @param size the initial size
	 */
	public DoubleArray(final int size) {
		super(Double.TYPE, size);
	}

	/**
	 * Constructs an extensible array of doubles, backed by the given fixed-size
	 * array.
	 * 
	 * @param array the array to wrap
	 */
	public DoubleArray(final double[] array) {
		super(Double.TYPE, array);
	}

	// -- DoubleArray methods --

	public void addValue(final double value) {
		addValue(size(), value);
	}

	public boolean removeValue(final double value) {
		final int index = indexOf(value);
		if (index < 0) return false;
		delete(index, 1);
		return true;
	}

	public double getValue(final int index) {
		checkBounds(index);
		return array[index];
	}

	public double setValue(final int index, final double value) {
		checkBounds(index);
		final double oldValue = getValue(index);
		array[index] = value;
		return oldValue;
	}

	public void addValue(final int index, final double value) {
		insert(index, 1);
		array[index] = value;
	}

	public int indexOf(final double value) {
		for (int i = 0; i < size(); i++) {
			if (array[i] == value) return i;
		}
		return -1;
	}

	public int lastIndexOf(final double value) {
		for (int i = size() - 1; i >= 0; i--) {
			if (array[i] == value) return i;
		}
		return -1;
	}

	public boolean contains(final double value) {
		return indexOf(value) >= 0;
	}

	// -- PrimitiveArray methods --

	@Override
	public double[] getArray() {
		return array;
	}

	@Override
	public void setArray(final double[] array) {
		if (array.length < size()) {
			throw new IllegalArgumentException("Array too small");
		}
		this.array = array;
	}

	// -- List methods --

	@Override
	public Double get(final int index) {
		return getValue(index);
	}

	@Override
	public Double set(final int index, final Double element) {
		return setValue(index, element == null ? defaultValue() : element);
	}

	@Override
	public void add(final int index, final Double element) {
		addValue(index, element);
	}

	// NB: Overridden for performance.
	@Override
	public int indexOf(final Object o) {
		if (!(o instanceof Double)) return -1;
		final double value = (Double) o;
		return indexOf(value);
	}

	// NB: Overridden for performance.
	@Override
	public int lastIndexOf(final Object o) {
		if (!(o instanceof Double)) return -1;
		final double value = (Double) o;
		return lastIndexOf(value);
	}

	// -- Collection methods --

	// NB: Overridden for performance.
	@Override
	public boolean contains(final Object o) {
		if (!(o instanceof Double)) return false;
		final double value = (Double) o;
		return contains(value);
	}

	// NB: Overridden for performance.
	@Override
	public boolean remove(final Object o) {
		if (!(o instanceof Double)) return false;
		final double value = (Double) o;
		return removeValue(value);
	}

	// NB: Overridden for performance.
	@Override
	public boolean containsAll(final Collection c) {
		for (final Object o : c) {
			if (!(o instanceof Double)) return false;
			final double value = (Double) o;
			if (indexOf(value) < 0) return false;
		}
		return true;
	}

	// NB: Overridden for performance.
	@Override
	public boolean addAll(final int index, final Collection c) {
		if (c.size() == 0) return false;
		insert(index, c.size());
		int i = index;
		for (final double e : c) {
			setValue(i++, e);
		}
		return true;
	}

	// NB: Overridden for performance.
	@Override
	public boolean removeAll(final Collection c) {
		boolean changed = false;
		for (final Object o : c) {
			if (!(o instanceof Double)) continue;
			final double value = (Double) o;
			final boolean result = removeValue(value);
			if (result) changed = true;
		}
		return changed;
	}

	@Override
	public Double defaultValue() {
		return 0.0;
	}
}




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