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Java implementation of the SciJava Ops matching engine.
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/*
* #%L
* Java implementation of the SciJava Ops matching engine.
* %%
* Copyright (C) 2016 - 2024 SciJava developers.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
* #L%
*/
package org.scijava.ops.engine.util;
import org.scijava.ops.api.OpInfo;
import org.scijava.ops.engine.OpDependencyMember;
import org.scijava.ops.engine.exceptions.impl.InvalidOpNameException;
import org.scijava.ops.engine.exceptions.impl.MultipleOutputsOpException;
import org.scijava.ops.engine.exceptions.impl.UnnamedOpException;
import org.scijava.struct.ItemIO;
import org.scijava.struct.Member;
import org.scijava.common3.Types;
import java.lang.reflect.ParameterizedType;
import java.lang.reflect.Type;
import java.lang.reflect.TypeVariable;
import java.util.Arrays;
import java.util.List;
import java.util.Objects;
import java.util.Optional;
import java.util.stream.Collectors;
/**
* Utility methods for working with {@link OpInfo}s.
*
* @author Curtis Rueden
* @author David Kolb
* @author Gabriel Selzer
*/
public final class Infos {
private Infos() {
// NB: prevent instantiation of utility class.
}
// -- Utility methods --
/**
* Parses op names contained in specified String according to the following
* format:
*
*
* 'prefix1'.'prefix2' , 'prefix1'.'prefix3'
*
*
* E.g. "math.add, math.pow".
*
* The name delimiter is a comma (,). Furthermore, names without prefixes are
* added. The above example will result in the following output:
*
*
*
* [math.add, add, math.pow, pow]
*
*
* @param names the string containing the names to parse
* @return an array of parsed Op names
*/
public static String[] parseNames(String names) {
return Arrays.stream(names.split(",")) //
.map(String::trim) //
.toArray(String[]::new);
}
/**
* Asserts common requirements for an {@link OpInfo} to be valid
*
* @param info the {@link OpInfo} to validate
*/
public static void validate(final OpInfo info) {
final long numOutputs = info.struct().members().stream() //
.filter(Member::isOutput).count();
if (numOutputs > 1) {
throw new MultipleOutputsOpException(info.implementationName());
}
if (Objects.isNull(info.names()) || info.names().isEmpty()) {
throw new UnnamedOpException(info.implementationName());
}
for (var name : info.names()) {
if (!name.contains(".")) {
throw new InvalidOpNameException(info, name);
}
}
}
/**
* Returns the index of the argument that is both the input and the output.
* If there is no such argument (i.e. the Op produces a pure output), -1 is
* returned
*
* @return the index of the mutable argument.
*/
public static int IOIndex(final OpInfo info) {
List> inputs = info.inputs();
Optional> ioArg = inputs.stream() //
.filter(m -> m.isInput() && m.isOutput()) //
.findFirst();
if (ioArg.isEmpty()) return -1;
Member> ioMember = ioArg.get();
return inputs.indexOf(ioMember);
}
public static boolean hasPureOutput(final OpInfo info) {
return IOIndex(info) == -1;
}
/** Gets the op's dependencies on other ops. */
public static List> dependencies(OpInfo info) {
return info.struct().members().stream() //
.filter(m -> m instanceof OpDependencyMember) //
.map(m -> (OpDependencyMember>) m) //
.collect(Collectors.toList());
}
/**
* Forms a verbose description of {@code info}
*
* @param info an {@link OpInfo}
* @return a verbose description of {@code info}
*/
public static String describe(final OpInfo info) {
final StringBuilder sb = new StringBuilder(info.implementationName());
// Step 2: Description (if present)
if (!info.description().isEmpty()) {
var desc = info.description().replaceAll("\n", "\n\t");
// Each input prepends \n\t so we don't want to end with newlines.
if (desc.endsWith("\n\t")) {
desc = desc.substring(0, desc.lastIndexOf("\n\t"));
}
sb.append("\n\t").append(desc);
}
// Step 3: Inputs
for (var member : info.inputs()) {
sb.append("\n\t");
sb.append("> ").append(member.key()) //
.append(member.isRequired() ? "" : " (optional)") //
.append(" : ");
if (member.getIOType() == ItemIO.CONTAINER) {
sb.append("@CONTAINER ");
}
else if (member.getIOType() == ItemIO.MUTABLE) {
sb.append("@MUTABLE ");
}
sb.append(typeString(member.type(), true)); //
if (!member.description().isBlank()) {
sb.append("\n\t\t").append(member.description().replaceAll("\n\\s*",
"\n\t\t"));
}
}
// Step 4: Output
Member> output = info.output();
if (output.getIOType() == ItemIO.OUTPUT) {
sb.append("\n\tReturns : ").append(typeString(output.type(), true));
}
return sb.toString();
}
private static String typeString(final Type input, final boolean verbose) {
var str = input.getTypeName();
if (verbose) return str;
if (input instanceof TypeVariable>) {
var bounds = ((TypeVariable>) input).getBounds();
String[] s = new String[bounds.length];
for (int i = 0; i < s.length; i++) {
s[i] = typeString(Types.raw(bounds[i]), false);
}
return String.join("+", s);
}
else if (input instanceof ParameterizedType) {
var pType = (ParameterizedType) input;
var raw = typeString(pType.getRawType(), false);
Type[] args = pType.getActualTypeArguments();
String[] s = new String[args.length];
for (int i = 0; i < args.length; i++) {
s[i] = typeString(args[i], false);
}
return raw + "<" + String.join(", ", s) + ">";
}
return str.replaceAll(
"([a-zA-Z_$][a-zA-Z\\d_$]*\\.)*([a-zA-Z_$][a-zA-Z\\d_$]*)", "$2");
}
}
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