
org.scijava.ops.flim.FitWorker Maven / Gradle / Ivy
Go to download
Show more of this group Show more artifacts with this name
Show all versions of scijava-ops-flim Show documentation
Show all versions of scijava-ops-flim Show documentation
Fluorescence lifetime analysis in SciJava Ops.
The newest version!
/*-
* #%L
* Fluorescence lifetime analysis in SciJava Ops.
* %%
* Copyright (C) 2024 SciJava developers.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
* #L%
*/
package org.scijava.ops.flim;
import net.imglib2.type.numeric.RealType;
import org.scijava.ops.flim.impl.LMAFit;
import org.scijava.ops.flim.impl.PhasorFit;
import java.util.List;
public interface FitWorker> {
/**
* The handler interface for fit events.
*
* @param The parameter type
*/
public interface FitEventHandler> {
/**
* The handler called by {@link FitWorker}s upon completion of all fits.
*
* @param params the params
* @param results the results
*/
default void onComplete(FitParams params, FitResults results) {}
/**
* The handler called by {@link FitWorker}s upon completion of a single fit.
*
* @param pos the x, y coordinate of the trans being fitted
* @param params the params (volatile) of the completed fit
* @param results the results (volatile) from the completed fit
*/
default void onSingleComplete(int[] pos, FitParams params,
FitResults results)
{}
}
/**
* How many parameters should there be in {@code results.param}? E.g. 3 for
* one-component {@link LMAFit.LMAFitWorker} and 5 for
* {@link PhasorFit.PhasorFitWorker}.
*
* @return The number of output parameters in the parameter array.
*/
int nParamOut();
/**
* How many bins will be fitted?
*
* @return {@code fitEnd - fitStart}
*/
int nDataOut();
;
/**
* Fit all coordinates listed and handles fit events.
*
* @param pos the coordinates of trans to fit
* @param handler the fit event handler
*/
void fitBatch(List pos, FitEventHandler handler);
}
© 2015 - 2025 Weber Informatics LLC | Privacy Policy