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Image processing operations for SciJava Ops.
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/*
* #%L
* Image processing operations for SciJava Ops.
* %%
* Copyright (C) 2014 - 2024 SciJava developers.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
*
* 1. Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
* 2. Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
* LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
* CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
* INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
* ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
* POSSIBILITY OF SUCH DAMAGE.
* #L%
*/
package org.scijava.ops.image.create;
import net.imglib2.Dimensions;
import net.imglib2.Interval;
import net.imglib2.img.Img;
import net.imglib2.img.ImgFactory;
import net.imglib2.img.ImgView;
import net.imglib2.type.Type;
import net.imglib2.view.Views;
/**
* Utility methods for working with {@link Img} objects.
*
* @author Curtis Rueden
*/
public final class Imgs {
private Imgs() {
// NB: Prevent instantiation of utility class.
}
/**
* Creates an {@link Img}.
*
* @param factory The {@link ImgFactory} to use to create the image.
* @param dims The dimensional bounds of the newly created image. If the given
* bounds are an {@link Interval}, the resultant {@link Img} will
* have the same min/max as that {@link Interval} as well (see
* {@link #adjustMinMax} for details).
* @param type The component type of the newly created image.
* @return the newly created {@link Img}
*/
public static > Img create(final ImgFactory factory,
final Dimensions dims, final T type)
{
return Imgs.adjustMinMax(factory.create(dims, type), dims);
}
/**
* Adjusts the given {@link Img} to match the bounds of the specified
* {@link Interval}.
*
* @param img An image whose min/max bounds might need adjustment.
* @param minMax An {@link Interval} whose min/max bounds to use when
* adjusting the image. If the provided {@code minMax} object is not
* an {@link Interval}, no adjustment is performed.
* @return A wrapped version of the input {@link Img} with bounds adjusted to
* match the provided {@link Interval}, if any; or the input image
* itself if no adjustment was needed/possible.
*/
public static > Img adjustMinMax(final Img img,
final Object minMax)
{
if (!(minMax instanceof Interval)) return img;
final Interval interval = (Interval) minMax;
final long[] min = new long[interval.numDimensions()];
interval.min(min);
for (int d = 0; d < min.length; d++) {
if (min[d] != 0) {
return ImgView.wrap(Views.translate(img, min), img.factory());
}
}
return img;
}
}
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