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Image processing operations for SciJava Ops.
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/*
* #%L
* Image processing operations for SciJava Ops.
* %%
* Copyright (C) 2014 - 2024 SciJava developers.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
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* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
* IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
* ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
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* SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
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package org.scijava.ops.image.threshold.localContrast;
import java.util.function.Function;
import net.imglib2.type.logic.BitType;
import net.imglib2.type.numeric.RealType;
import net.imglib2.util.Pair;
import org.scijava.function.Computers;
import org.scijava.ops.spi.OpDependency;
/**
* Local threshold method which determines whether a pixel is closer to the
* maximum or minimum pixel of a neighborhood.
*
* @author Jonathan Hale
* @author Stefan Helfrich (University of Konstanz)
* @implNote op names='threshold.localContrast'
*/
public class ComputeLocalContrastThreshold> implements
Computers.Arity2, T, BitType>
{
@OpDependency(name = "stats.minMax")
private Function, Pair> minMaxOp;
/**
* TODO
*
* @param inputNeighborhood
* @param inputCenterPixel
* @param output
*/
@Override
public void compute(final Iterable inputNeighborhood,
final T inputCenterPixel, final BitType output)
{
compute(inputNeighborhood, inputCenterPixel, minMaxOp, output);
}
public static > void compute(
final Iterable inputNeighborhood, final T inputCenterPixel,
final Function, Pair> minMaxOp, final BitType output)
{
final Pair outputs = minMaxOp.apply(inputNeighborhood);
final double centerValue = inputCenterPixel.getRealDouble();
final double diffMin = centerValue - outputs.getA().getRealDouble();
final double diffMax = outputs.getB().getRealDouble() - centerValue;
// set to background (false) if pixel closer to min value,
// and to foreground (true) if pixel closer to max value.
// If diffMin and diffMax are equal, output will be set to fg.
output.set(diffMin <= diffMax);
}
}
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