pro.parseq.vcf.exceptions.InvalidVcfFileException Maven / Gradle / Ivy

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Library for Variant Call Format (VCF) files manipulation

There is a newer version: 1.1.1-RELEASE

/*******************************************************************************
 *     Copyright 2016-2017 the original author or authors.
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *  
 *******************************************************************************/
package pro.parseq.vcf.exceptions;

/**
 * Represents inconsistency with variant call format (VCF) specification
 * 
 * @author Alexander Afanasyev [email protected]
 */
public class InvalidVcfFileException extends Exception {

	private static final long serialVersionUID = 4500138963281993514L;

	// Represents line's number caused the exception in case of VCF file parsing
	private Integer line = null;

	public InvalidVcfFileException(String message) {
		super(message);
	}

	public InvalidVcfFileException(int line, String message) {
		super(message);
		this.line = line;
	}

	public int getLine() {
		return line;
	}

	public void setLine(int line) {
		this.line = line;
	}
}