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    Download embl-api-core JAR 1.1.141 with all dependencies


    flat file parser and validator

    Files of the artifact embl-api-core version 1.1.141 from the group uk.ac.ebi.ena.sequence.

    Test

    Artifact embl-api-core
    Group uk.ac.ebi.ena.sequence
    Version 1.1.141
    Last update 29. September 2016
    Tags: file flat validator parser
    Organization not specified
    URL http://www.ebi.ac.uk/ena
    License The Apache License, Version 2.0
    Dependencies amount 7
    Dependencies commons-collections, commons-lang, commons-lang3, jcommander, json, commons-dbutils, log4j,
    There are maybe transitive dependencies!
    There is a newer version: 1.1.265
    Show newest version
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    Show all versions of embl-api-core Show documentation

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    Source code of embl-api-core version 1.1.141

    META-INF
    META-INF.META-INF.MANIFEST.MF
    uk.ac.ebi.embl.api
    uk.ac.ebi.embl.api.uk.ac.ebi.embl.api.EmblApiCore.gwt.xml
    uk.ac.ebi.embl.api.uk.ac.ebi.embl.api.EntityExistsException
    uk.ac.ebi.embl.api.uk.ac.ebi.embl.api.EntityNotFoundException
    uk.ac.ebi.embl.api.uk.ac.ebi.embl.api.RepositoryException
    uk.ac.ebi.embl.api.checksum
    uk.ac.ebi.embl.api.checksum.uk.ac.ebi.embl.api.checksum.CRC32
    uk.ac.ebi.embl.api.checksum.uk.ac.ebi.embl.api.checksum.MD5Checksum
    uk.ac.ebi.embl.api.entry
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.AgpRow
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.Assembly
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.ContigSequenceInfo
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.Entry
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.EntryFactory
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.MasterEntryInfo
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.Text
    uk.ac.ebi.embl.api.entry.uk.ac.ebi.embl.api.entry.XRef
    uk.ac.ebi.embl.api.entry.feature
    uk.ac.ebi.embl.api.entry.feature.uk.ac.ebi.embl.api.entry.feature.CdsFeature
    uk.ac.ebi.embl.api.entry.feature.uk.ac.ebi.embl.api.entry.feature.Feature
    uk.ac.ebi.embl.api.entry.feature.uk.ac.ebi.embl.api.entry.feature.FeatureFactory
    uk.ac.ebi.embl.api.entry.feature.uk.ac.ebi.embl.api.entry.feature.PeptideFeature
    uk.ac.ebi.embl.api.entry.feature.uk.ac.ebi.embl.api.entry.feature.SourceFeature
    uk.ac.ebi.embl.api.entry.location
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.AbstractLocation
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Base
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Between
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.CompoundLocation
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Gap
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Join
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.LocalBase
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.LocalBetween
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.LocalLocation
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.LocalRange
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Location
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.LocationFactory
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Order
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.Range
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.RemoteBase
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.RemoteBetween
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.RemoteLocation
    uk.ac.ebi.embl.api.entry.location.uk.ac.ebi.embl.api.entry.location.RemoteRange
    uk.ac.ebi.embl.api.entry.qualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.AminoAcid
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.AminoAcidFactory
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.AnticodonQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.CodonQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.CodonStartQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.LocationQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.OrganismQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.ProteinIdQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.Qualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.QualifierFactory
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.Rpt_Unit_RangeQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.Tag_PeptideQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.TranslExceptQualifier
    uk.ac.ebi.embl.api.entry.qualifier.uk.ac.ebi.embl.api.entry.qualifier.TranslTableQualifier
    uk.ac.ebi.embl.api.entry.reference
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Article
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Book
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.ElectronicReference
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Patent
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Person
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Publication
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Reference
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.ReferenceFactory
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Submission
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Thesis
    uk.ac.ebi.embl.api.entry.reference.uk.ac.ebi.embl.api.entry.reference.Unpublished
    uk.ac.ebi.embl.api.entry.sequence
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.AbstractSequence
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.AccessionFormatException
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.Complementer
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.ReverseComplementer
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.Segment
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.SegmentFactory
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.Sequence
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.SequenceAccession
    uk.ac.ebi.embl.api.entry.sequence.uk.ac.ebi.embl.api.entry.sequence.SequenceFactory
    uk.ac.ebi.embl.api.genomeassembly
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.AssemblyRecord
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.ChromosomeRecord
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.GenomeAssemblyRecord
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.GenomeAssemblyRow
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.PlacedRecord
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.UnlocalisedRecord
    uk.ac.ebi.embl.api.genomeassembly.uk.ac.ebi.embl.api.genomeassembly.UnplacedRecord
    uk.ac.ebi.embl.api.gff3
    uk.ac.ebi.embl.api.gff3.uk.ac.ebi.embl.api.gff3.GFF3Record
    uk.ac.ebi.embl.api.gff3.uk.ac.ebi.embl.api.gff3.GFF3RecordSet
    uk.ac.ebi.embl.api.project
    uk.ac.ebi.embl.api.project.uk.ac.ebi.embl.api.project.Center
    uk.ac.ebi.embl.api.project.uk.ac.ebi.embl.api.project.Project
    uk.ac.ebi.embl.api.storage
    uk.ac.ebi.embl.api.storage.uk.ac.ebi.embl.api.storage.CachedFileDataManager
    uk.ac.ebi.embl.api.storage.uk.ac.ebi.embl.api.storage.DataManager
    uk.ac.ebi.embl.api.storage.uk.ac.ebi.embl.api.storage.DataRow
    uk.ac.ebi.embl.api.storage.uk.ac.ebi.embl.api.storage.DataSet
    uk.ac.ebi.embl.api.storage.tsv
    uk.ac.ebi.embl.api.storage.tsv.uk.ac.ebi.embl.api.storage.tsv.TSVReader
    uk.ac.ebi.embl.api.taxonomy
    uk.ac.ebi.embl.api.taxonomy.uk.ac.ebi.embl.api.taxonomy.HasTaxon
    uk.ac.ebi.embl.api.taxonomy.uk.ac.ebi.embl.api.taxonomy.Taxon
    uk.ac.ebi.embl.api.taxonomy.uk.ac.ebi.embl.api.taxonomy.TaxonFactory
    uk.ac.ebi.embl.api.translation
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.AbstractTranslator
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.CdsTranslator
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.Codon
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.CodonTranslator
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.SimpleTranslator
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.TranslationResult
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.TranslationResultWriter
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.TranslationTable
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.TranslationTableDescriptor
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.TranslationTableFactory
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.Translator
    uk.ac.ebi.embl.api.translation.uk.ac.ebi.embl.api.translation.UnAmbiguousCodon
    uk.ac.ebi.embl.api.validation
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.CVTable
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.EmblEntryValidationCheck
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.EntryValidations
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ExtendedMessage
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ExtendedResult
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.FileType
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.FixerMessages.properties
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.GFF3ValidationMessages.properties
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.GenomeAssemblyFixerMessages.properties
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.GenomeAssemblyValidationMessages.properties
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.HasOrigin
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.LocationComparator
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.Origin
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.SequenceEntryUtils
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.SequenceType
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.Severity
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationCheck
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationEngineException
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationException
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationMessage
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationMessageManager
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationMessages.properties
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationPlanResult
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationResult
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidationScope
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.Validator
    uk.ac.ebi.embl.api.validation.uk.ac.ebi.embl.api.validation.ValidatorImpl
    uk.ac.ebi.embl.api.validation.annotation
    uk.ac.ebi.embl.api.validation.annotation.uk.ac.ebi.embl.api.validation.annotation.CheckDataRow
    uk.ac.ebi.embl.api.validation.annotation.uk.ac.ebi.embl.api.validation.annotation.CheckDataSet
    uk.ac.ebi.embl.api.validation.annotation.uk.ac.ebi.embl.api.validation.annotation.Description
    uk.ac.ebi.embl.api.validation.annotation.uk.ac.ebi.embl.api.validation.annotation.ExcludeScope
    uk.ac.ebi.embl.api.validation.annotation.uk.ac.ebi.embl.api.validation.annotation.GroupIncludeScope
    uk.ac.ebi.embl.api.validation.annotation.uk.ac.ebi.embl.api.validation.annotation.RemoteExclude
    uk.ac.ebi.embl.api.validation.check
    uk.ac.ebi.embl.api.validation.check.uk.ac.ebi.embl.api.validation.check.CheckFileManager
    uk.ac.ebi.embl.api.validation.check.entries
    uk.ac.ebi.embl.api.validation.check.entries.uk.ac.ebi.embl.api.validation.check.entries.EntriesValidationCheck
    uk.ac.ebi.embl.api.validation.check.entries.uk.ac.ebi.embl.api.validation.check.entries.Entry_NameCheck
    uk.ac.ebi.embl.api.validation.check.entry
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.AGPValidationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.AntiCodonTranslationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.AssemblyLevelDataclassCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.AssemblyLevelEntryNameCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.AssemblySecondarySpanCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.AssemblyTopologyCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.Assembly_gapFeatureCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.CitationExistsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.CitationQualifierCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.DataclassCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.DuplicateFeatureCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.EntryContigsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.EntryFeatureLocationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.EntryMolTypeCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.EntryNameExistsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.EntryProjectIdCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.EntryValidationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.ExonFeaturesIntervalCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.FeatureAndMoleculeTypeCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.FeatureAndSourceQualifierCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.FeaturewithRemoteLocationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.GapFeatureBasesCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.GapFeatureLocationsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.GeneAssociationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.GeneFeatureLocusTagCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.HoldDateCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.KWCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.LocusTagAssociationCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.LocusTagCoverageCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.LocusTagPrefixCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.LocustagExistsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.MasterEntryDescriptionCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.MasterEntryExistsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.MasterEntrySourceCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.MoleculeTypeAndDataclassCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.MoleculeTypeAndFeatureCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.OperonFeatureCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.OrganismAndPermittedQualifierCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.PeptideFeatureCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.PrimaryAccessionCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.ProteinIdExistsCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.QualifierAndRequiredQualifierinEntryCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.QualifierPatternAndFeatureCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.QualifierValueNotQualifierEntryCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.QualifierValueRequiredQualifierValueEntryCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.RRNAQualifierValueOrOrganismAndQualifierValueCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.ReferenceCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.SequenceBasesCheck
    uk.ac.ebi.embl.api.validation.check.entry.uk.ac.ebi.embl.api.validation.check.entry.WGSGapCheck
    uk.ac.ebi.embl.api.validation.check.feature
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.AntiCodonQualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.CdsFeatureAminoAcidCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.CdsFeatureTranslationCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.CollectionDateQualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.DeprecatedQualifiersCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.EC_numberCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.EC_numberandProductValueCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.EstimatedLengthCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.ExclusiveQualifiersCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.ExclusiveQualifiersWithSameValueCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.FeatureKeyCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.FeatureLengthCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.FeatureLocationCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.FeatureLocationTypeCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.FeatureQualifiersRequiredCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.FeatureValidationCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.IntronLengthWithinCDSCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.Isolation_sourceQualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.NcRNAQualifierValueAndQualifierPatternCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.PCRPrimersQualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierAndRequiredQualifierinFeatureCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierPatternAndQualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierValueNotQualifierCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierValueNotQualifierPatternCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierValueRequiredQualifierStartsWithValueCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.QualifierValueRequiredQualifierValueCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.SimpleFeatureLocationCheck
    uk.ac.ebi.embl.api.validation.check.feature.uk.ac.ebi.embl.api.validation.check.feature.UnbalancedParenthesesCheck
    uk.ac.ebi.embl.api.validation.check.genomeassembly
    uk.ac.ebi.embl.api.validation.check.genomeassembly.uk.ac.ebi.embl.api.validation.check.genomeassembly.AssemblyFieldandValueCheck
    uk.ac.ebi.embl.api.validation.check.genomeassembly.uk.ac.ebi.embl.api.validation.check.genomeassembly.ChromosomeFieldandValueCheck
    uk.ac.ebi.embl.api.validation.check.genomeassembly.uk.ac.ebi.embl.api.validation.check.genomeassembly.GenomeAssemblyValidationCheck
    uk.ac.ebi.embl.api.validation.check.genomeassembly.uk.ac.ebi.embl.api.validation.check.genomeassembly.UnlocalisedFieldandValueCheck
    uk.ac.ebi.embl.api.validation.check.gff3
    uk.ac.ebi.embl.api.validation.check.gff3.uk.ac.ebi.embl.api.validation.check.gff3.AttributeCheck
    uk.ac.ebi.embl.api.validation.check.gff3.uk.ac.ebi.embl.api.validation.check.gff3.GFF3ValidationCheck
    uk.ac.ebi.embl.api.validation.check.gff3.uk.ac.ebi.embl.api.validation.check.gff3.StartEndCheck
    uk.ac.ebi.embl.api.validation.check.gff3.uk.ac.ebi.embl.api.validation.check.gff3.TypeCheck
    uk.ac.ebi.embl.api.validation.check.sequence
    uk.ac.ebi.embl.api.validation.check.sequence.uk.ac.ebi.embl.api.validation.check.sequence.AssemblyLevelSequenceCheck
    uk.ac.ebi.embl.api.validation.check.sequence.uk.ac.ebi.embl.api.validation.check.sequence.SequenceBasesCheck
    uk.ac.ebi.embl.api.validation.check.sequence.uk.ac.ebi.embl.api.validation.check.sequence.SequenceExistsCheck
    uk.ac.ebi.embl.api.validation.check.sequence.uk.ac.ebi.embl.api.validation.check.sequence.SequenceLengthCheck
    uk.ac.ebi.embl.api.validation.check.sequence.uk.ac.ebi.embl.api.validation.check.sequence.SequenceToGapFeatureBasesCheck
    uk.ac.ebi.embl.api.validation.check.sequence.uk.ac.ebi.embl.api.validation.check.sequence.SequenceValidationCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.ChromosomeSourceQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.ExclusiveSourceQualifiersCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.HostQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.MoleculeTypeAndOrganismCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.MoleculeTypeAndSourceQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.OrganismAndRequiredQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.OrganismNotQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.OrganismPatternAndQualifierValueCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.SequenceCoverageCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.SingleSourceQualifiersCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.SourceFeatureOnlyCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.SourceFeatureQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.SourceQualifierPatternAndFeatureCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.TaxonomicDivisionNotQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.TaxonomicDivisionQualifierCheck
    uk.ac.ebi.embl.api.validation.check.sourcefeature.uk.ac.ebi.embl.api.validation.check.sourcefeature.Type_materialQualifierCheck
    uk.ac.ebi.embl.api.validation.cvtable
    uk.ac.ebi.embl.api.validation.cvtable.uk.ac.ebi.embl.api.validation.cvtable.cv_fqual_value_fix_table
    uk.ac.ebi.embl.api.validation.dao
    uk.ac.ebi.embl.api.validation.dao.uk.ac.ebi.embl.api.validation.dao.EntryDAOUtils
    uk.ac.ebi.embl.api.validation.dao.uk.ac.ebi.embl.api.validation.dao.EntryDAOUtilsImpl
    uk.ac.ebi.embl.api.validation.dao.uk.ac.ebi.embl.api.validation.dao.EraproDAOUtils
    uk.ac.ebi.embl.api.validation.dao.uk.ac.ebi.embl.api.validation.dao.EraproDAOUtilsImpl
    uk.ac.ebi.embl.api.validation.data
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.artemis-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.chromosome-location-keywords.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.con-no-keywords.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.dataclass.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.deprecated-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.exclusive-qualifiers-same-value.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.exclusive-qualifiers-to-remove.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.exclusive-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-key-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-keys.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-moltype.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-not-require-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-qualifier-rename.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-qualifier-values.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-regex-groups.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-rename.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-require-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.feature-source-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.genome-assembly-keywords.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.keyword_dataclass.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.moltype-feature.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.moltype-organism.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.moltype-source-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.ncrna-qualifier-value-qualifier-pattern.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.nucleotide-code.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.obsoletefeature-to-feature.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.organism-no-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.organism-permitted-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.organism-qualifier-pattern.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.organism-required-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-pattern-feature.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-pattern-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-required-qualifier-in-entry.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-required-qualifier-in-feature.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-value-not-qualifier-entry.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-value-not-qualifier-pattern.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-value-not-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-value-required-qualifier-entry-value.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-value-required-qualifier-startswith-value.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.qualifier-value-required-qualifier-value.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.rrna-qualifier-value-organism-qualifier-value.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.single-source-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.source-exclusive-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.source-qualifier-pattern-feature.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.source-required-qualifiers.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.source_qualifier_moltype_value.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.taxonomic_division-no-qualifier.tsv
    uk.ac.ebi.embl.api.validation.data.uk.ac.ebi.embl.api.validation.data.taxonomic_division-qualifier.tsv
    uk.ac.ebi.embl.api.validation.fix.genomeassembly
    uk.ac.ebi.embl.api.validation.fix.genomeassembly.uk.ac.ebi.embl.api.validation.fix.genomeassembly.DeleteInvalidRowFix
    uk.ac.ebi.embl.api.validation.fixer.entry
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.AgpComponentAccessionFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.AgptoConFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.AnticodonQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyLevelDataClassFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyLevelSubmitterReferenceFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.AssemblyTopologyFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.CDS_RNA_LocusFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.ContoAGPFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.DataclassFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.DeleteEntryOnErrorFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.GaptoAssemblyGapFeatureFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.GeneAssociatedwithFeatureFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.GeneAssociationFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.GeneSynonymFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.HoldDateFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.LocusTagAssociationFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.MoleculeTypeAndQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.NonContoAGPFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.ProteinIdRemovalFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.ReferencePositionFix
    uk.ac.ebi.embl.api.validation.fixer.entry.uk.ac.ebi.embl.api.validation.fixer.entry.TPA_dataclass_Fix
    uk.ac.ebi.embl.api.validation.fixer.feature
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.CollectionDateQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.EC_numberValueFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.EC_numberfromProductValueFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.ExclusiveQualifierTransformToNoteQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.ExperimentQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.FeatureLocationFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.FeatureQualifierDuplicateValueFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.FeatureQualifierRenameFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.FeatureRenameFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.Isolation_sourceQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.Linkage_evidenceFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.LocusTagValueFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.ObsoleteFeatureFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.ObsoleteFeaturetoNewFeatureFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.QualifierValueFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.QualifierWithinQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.feature.uk.ac.ebi.embl.api.validation.fixer.feature.Transl_exceptLocationFix
    uk.ac.ebi.embl.api.validation.fixer.sequence
    uk.ac.ebi.embl.api.validation.fixer.sequence.uk.ac.ebi.embl.api.validation.fixer.sequence.AssemblyLevelSequenceFix
    uk.ac.ebi.embl.api.validation.fixer.sequence.uk.ac.ebi.embl.api.validation.fixer.sequence.ContigstosequenceFix
    uk.ac.ebi.embl.api.validation.fixer.sequence.uk.ac.ebi.embl.api.validation.fixer.sequence.Mol_typeFix
    uk.ac.ebi.embl.api.validation.fixer.sequence.uk.ac.ebi.embl.api.validation.fixer.sequence.SequenceBasesFix
    uk.ac.ebi.embl.api.validation.fixer.sequence.uk.ac.ebi.embl.api.validation.fixer.sequence.SequenceToGapFeatureBasesFix
    uk.ac.ebi.embl.api.validation.fixer.sourcefeature
    uk.ac.ebi.embl.api.validation.fixer.sourcefeature.uk.ac.ebi.embl.api.validation.fixer.sourcefeature.AssemblySourceQualiferFix
    uk.ac.ebi.embl.api.validation.fixer.sourcefeature.uk.ac.ebi.embl.api.validation.fixer.sourcefeature.HostQualifierFix
    uk.ac.ebi.embl.api.validation.fixer.sourcefeature.uk.ac.ebi.embl.api.validation.fixer.sourcefeature.SourceQualifierMissingFix
    uk.ac.ebi.embl.api.validation.fixer.sourcefeature.uk.ac.ebi.embl.api.validation.fixer.sourcefeature.StrainQualifierValueFix
    uk.ac.ebi.embl.api.validation.fixer.sourcefeature.uk.ac.ebi.embl.api.validation.fixer.sourcefeature.TaxonomicDivisionNotQualifierFix
    uk.ac.ebi.embl.api.validation.helper
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.ByteBufferUtils
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.DataclassProvider
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.EntryUtils
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.FileUtils
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.FlatFileComparator
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.FlatFileComparatorException
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.FlatFileComparatorOptions
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.FlattenedMessageResult
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.FlattenedValidationPlanResult
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.Utils
    uk.ac.ebi.embl.api.validation.helper.uk.ac.ebi.embl.api.validation.helper.ValidationMessageComparator
    uk.ac.ebi.embl.api.validation.helper.location
    uk.ac.ebi.embl.api.validation.helper.location.uk.ac.ebi.embl.api.validation.helper.location.LocationStringParser
    uk.ac.ebi.embl.api.validation.helper.location.uk.ac.ebi.embl.api.validation.helper.location.LocationToStringCoverter
    uk.ac.ebi.embl.api.validation.helper.taxon
    uk.ac.ebi.embl.api.validation.helper.taxon.uk.ac.ebi.embl.api.validation.helper.taxon.TaxonHelper
    uk.ac.ebi.embl.api.validation.helper.taxon.uk.ac.ebi.embl.api.validation.helper.taxon.TaxonHelperImpl
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