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/*
* DocumentFormat.java
*
* Copyright (c) 1995-2012, The University of Sheffield. See the file
* COPYRIGHT.txt in the software or at http://gate.ac.uk/gate/COPYRIGHT.txt
*
* This file is part of GATE (see http://gate.ac.uk/), and is free
* software, licenced under the GNU Library General Public License,
* Version 2, June 1991 (in the distribution as file licence.html,
* and also available at http://gate.ac.uk/gate/licence.html).
*
* Hamish Cunningham, 25/May/2000
*
* $Id: DocumentFormat.java 19756 2016-11-19 01:55:44Z markagreenwood $
*/
package gate;
import gate.corpora.MimeType;
import gate.corpora.RepositioningInfo;
import gate.creole.AbstractLanguageResource;
import gate.event.StatusListener;
import gate.util.BomStrippingInputStreamReader;
import gate.util.DocumentFormatException;
import gate.util.GateException;
import java.io.IOException;
import java.io.InputStream;
import java.io.Reader;
import java.io.UnsupportedEncodingException;
import java.net.URL;
import java.net.URLConnection;
import java.nio.file.Files;
import java.util.Collections;
import java.util.HashMap;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.StringTokenizer;
import java.util.Vector;
import org.apache.commons.io.IOUtils;
/** The format of Documents. Subclasses of DocumentFormat know about
* particular MIME types and how to unpack the information in any
* markup or formatting they contain into GATE annotations. Each MIME
* type has its own subclass of DocumentFormat, e.g. XmlDocumentFormat,
* RtfDocumentFormat, MpegDocumentFormat. These classes register themselves
* with a static index residing here when they are constructed. Static
* getDocumentFormat methods can then be used to get the appropriate
* format class for a particular document.
*/
public abstract class DocumentFormat
extends AbstractLanguageResource {
private static final long serialVersionUID = 4147880563349143923L;
/** The MIME type of this format. */
private MimeType mimeType = null;
/** Map of MimeTypeString to ClassHandler class. This is used to find the
* language resource that deals with the specific Document format
*/
protected static final Map
mimeString2ClassHandlerMap = new HashMap();
/** Map of MimeType to DocumentFormat Class. This is used to find the
* DocumentFormat subclass that deals with a particular MIME type.
*/
protected static final Map
mimeString2mimeTypeMap = new HashMap();
/** Map of Set of file suffixes to MimeType. This is used to figure
* out what MIME type a document is from its file name.
*/
protected static final Map
suffixes2mimeTypeMap = new HashMap();
/** Map of Set of magic numbers to MimeType. This is used to guess the
* MIME type of a document, when we don't have any other clues.
*/
protected static final Map
magic2mimeTypeMap = new HashMap();
/** Map of markup elements to annotation types. If it is null, the
* unpackMarkup() method will convert all markup, using the element names
* for annotation types. If it is non-null, only those elements specified
* here will be converted.
*/
protected Map markupElementsMap = null;
/** This map is used inside uppackMarkup() method...
* When an element from the map is encounted, The corresponding string
* element is added to the document content
*/
protected Map element2StringMap = null;
/** The features of this resource */
private FeatureMap features = null;
/** Default construction */
public DocumentFormat() {}
/** listeners for status report */
private transient Vector statusListeners;
/** Flag for enable/disable collecting of repositioning information */
private Boolean shouldCollectRepositioning = Boolean.FALSE;
/** If the document format could collect repositioning information
* during the unpack phase this method will return true.
*
* You should override this method in the child class of the defined
* document format if it could collect the repositioning information.
*/
public Boolean supportsRepositioning() {
return Boolean.FALSE;
} // supportsRepositioning
public void setShouldCollectRepositioning(Boolean b) {
if(supportsRepositioning().booleanValue() && b.booleanValue()) {
shouldCollectRepositioning = b;
}
else {
shouldCollectRepositioning = Boolean.FALSE;
} // if
} // setShouldCollectRepositioning
public Boolean getShouldCollectRepositioning() {
return shouldCollectRepositioning;
} //
/** Unpack the markup in the document. This converts markup from the
* native format (e.g. XML, RTF) into annotations in GATE format.
* Uses the markupElementsMap to determine which elements to convert, and
* what annotation type names to use.
*/
abstract public void unpackMarkup(Document doc)
throws DocumentFormatException;
abstract public void unpackMarkup(Document doc, RepositioningInfo repInfo,
RepositioningInfo ampCodingInfo)
throws DocumentFormatException;
/** Unpack the markup in the document. This method calls unpackMarkup on the
* GATE document, but after it saves its content as a feature attached to
* the document. This method is useful if one wants to save the content
* of the document being unpacked. After the markups have been unpacked,
* the content of the document will be replaced with a new one containing
* the text between markups.
*
* @param doc the document that will be unpacked
* @param originalContentFeatureType the name of the feature that will hold
* the document's content.
*/
public void unpackMarkup( Document doc,
String originalContentFeatureType )
throws DocumentFormatException{
FeatureMap fm = doc.getFeatures();
if (fm == null) fm = Factory.newFeatureMap();
fm.put(originalContentFeatureType, doc.getContent().toString());
doc.setFeatures(fm);
unpackMarkup(doc);
}// unpackMarkup();
/**
* Returns a MimeType having as input a fileSufix.
* If the file sufix is null or not recognised then,
* null will be returned.
* @param fileSufix The file sufix associated with a recognisabe mime type.
* @return The MimeType associated with this file suffix.
*/
static private MimeType getMimeType(String fileSufix){
// Get a mimeType string associated with this fileSuffix
// Eg: for html returns MimeType("text/html"), for xml returns
// MimeType("text/xml")
if(fileSufix == null) return null;
return suffixes2mimeTypeMap.get(fileSufix.toLowerCase());
}//getMimeType
public static Set getSupportedMimeTypes() {
return Collections.unmodifiableSet(mimeString2mimeTypeMap.keySet());
}
/**
* Returns a MymeType having as input a URL object. If the MimeType wasn't
* recognized it returns null.
* @param url The URL object from which the MimeType will be extracted
* @return A MimeType object for that URL, or null if the Mime Type is
* unknown.
*/
static private MimeType getMimeType(URL url) {
String mimeTypeString = null;
String charsetFromWebServer = null;
String contentType = null;
InputStream is = null;
MimeType mimeTypeFromWebServer = null;
MimeType mimeTypeFromFileSuffix = null;
MimeType mimeTypeFromMagicNumbers = null;
if (url == null)
return null;
// Ask the web server for the content type
// We expect to get contentType something like this:
// "text/html; charset=iso-8859-1"
// Charset is optional
try {
try{
URLConnection urlconn = url.openConnection();
is = urlconn.getInputStream();
contentType = urlconn.getContentType();
} catch (IOException e){
// Failed to get the content type with te Web server.
// Let's try some other methods like FileSuffix or magic numbers.
}
// If a content Type was returned by the server, try to get the mime Type
// string
// If contentType is something like this:"text/html; charset=iso-8859-1"
// try to get content Type string (text/html)
if (contentType != null){
StringTokenizer st = new StringTokenizer(contentType, ";");
// We assume that the first token is the mime type string...
// If this doesn't happen then BAD LUCK :(( ...
if (st.hasMoreTokens())
mimeTypeString = st.nextToken().toLowerCase();
// The next token it should be the CharSet
if (st.hasMoreTokens())
charsetFromWebServer = st.nextToken().toLowerCase();
if (charsetFromWebServer != null){
//We have something like : "charset=iso-8859-1" and let's extract the
// encoding.
st = new StringTokenizer(charsetFromWebServer, "=");
// Don't need this anymore
charsetFromWebServer = null;
// Discarding the first token which is : "charset"
if (st.hasMoreTokens())
st.nextToken();
// Get the encoding : "ISO-8859-1"
if (st.hasMoreTokens())
charsetFromWebServer = st.nextToken().toUpperCase();
} // End if
}// end if
// Return the corresponding MimeType with WebServer from the associated MAP
mimeTypeFromWebServer = mimeString2mimeTypeMap.get(mimeTypeString);
// Let's try a file suffix detection
// mimeTypeFromFileSuffix = getMimeType(getFileSuffix(url));
for(String suffix : getFileSuffixes(url)) {
mimeTypeFromFileSuffix = getMimeType(suffix);
if(mimeTypeFromFileSuffix != null) break;
}
// Let's perform a magic numbers guess..
mimeTypeFromMagicNumbers = guessTypeUsingMagicNumbers(is,
charsetFromWebServer);
}
finally {
IOUtils.closeQuietly(is); //null safe
}
//All those types enter into a deciding system
return decideBetweenThreeMimeTypes( mimeTypeFromWebServer,
mimeTypeFromFileSuffix,
mimeTypeFromMagicNumbers);
}//getMimeType
/**
* This method decides what mimeType is in majority
* @param aMimeTypeFromWebServer a MimeType
* @param aMimeTypeFromFileSuffix a MimeType
* @param aMimeTypeFromMagicNumbers a MimeType
* @return the MimeType which occurs most. If all are null, then returns
* null
*/
protected static MimeType decideBetweenThreeMimeTypes(
MimeType aMimeTypeFromWebServer,
MimeType aMimeTypeFromFileSuffix,
MimeType aMimeTypeFromMagicNumbers){
// First a voting system
if (areEqual(aMimeTypeFromWebServer,aMimeTypeFromFileSuffix))
return aMimeTypeFromFileSuffix;
if (areEqual(aMimeTypeFromFileSuffix,aMimeTypeFromMagicNumbers))
return aMimeTypeFromFileSuffix;
if (areEqual(aMimeTypeFromWebServer,aMimeTypeFromMagicNumbers))
return aMimeTypeFromWebServer;
// 1 is the highest priority
if (aMimeTypeFromFileSuffix != null)
aMimeTypeFromFileSuffix.addParameter("Priority","1");
// 2 is the second priority
if (aMimeTypeFromWebServer != null)
aMimeTypeFromWebServer.addParameter("Priority","2");
// 3 is the third priority
if (aMimeTypeFromMagicNumbers != null)
aMimeTypeFromMagicNumbers.addParameter("Priority","3");
return decideBetweenTwoMimeTypes(
decideBetweenTwoMimeTypes(aMimeTypeFromWebServer,
aMimeTypeFromFileSuffix),
aMimeTypeFromMagicNumbers);
}// decideBetweenThreeMimeTypes
/** Decide between two mimeTypes. The decistion is made on "Priority"
* parameter set into decideBetweenThreeMimeTypes method. If both mimeTypes
* doesn't have "Priority" paramether set, it will return one on them.
* @param aMimeType a MimeType object with "Prority" parameter set
* @param anotherMimeType a MimeType object with "Prority" parameter set
* @return One of the two mime types.
*/
protected static MimeType decideBetweenTwoMimeTypes( MimeType aMimeType,
MimeType anotherMimeType){
if (aMimeType == null) return anotherMimeType;
if (anotherMimeType == null) return aMimeType;
int priority1 = 0;
int priority2 = 0;
// Both of them are not null
if (aMimeType.hasParameter("Priority"))
try{
priority1 =
Integer.parseInt(aMimeType.getParameterValue("Priority"));
}catch (NumberFormatException e){
return anotherMimeType;
}
if (anotherMimeType.hasParameter("Priority"))
try{
priority2 =
Integer.parseInt(anotherMimeType.getParameterValue("Priority"));
}catch (NumberFormatException e){
return aMimeType;
}
// The lower the number, the highest the priority
if (priority1 <= priority2)
return aMimeType;
else
return anotherMimeType;
}// decideBetweenTwoMimeTypes
/**
* Tests if two MimeType objects are equal.
* @return true only if boths MimeType objects are different than null
* and their Types and Subtypes are equals. The method is case sensitive.
*/
protected static boolean areEqual( MimeType aMimeType,
MimeType anotherMimeType){
if (aMimeType == null || anotherMimeType == null)
return false;
if ( aMimeType.getType().equals(anotherMimeType.getType()) &&
aMimeType.getSubtype().equals(anotherMimeType.getSubtype())
) return true;
else
return false;
}// are Equal
/**
* This method tries to guess the mime Type using some magic numbers.
* @param aInputStream a InputStream which has to be transformed into a
* InputStreamReader
* @param anEncoding the encoding. If is null or unknown then a
* InputStreamReader with default encodings will be created.
* @return the mime type associated with magic numbers
*/
protected static MimeType guessTypeUsingMagicNumbers(InputStream aInputStream,
String anEncoding){
if (aInputStream == null) return null;
Reader reader = null;
if (anEncoding != null)
try{
reader = new BomStrippingInputStreamReader(aInputStream, anEncoding);
} catch (UnsupportedEncodingException e){
reader = null;
}
if (reader == null)
// Create a reader with the default encoding system
reader = new BomStrippingInputStreamReader(aInputStream);
// We have a input stream reader
return runMagicNumbers(reader);
}//guessTypeUsingMagicNumbers
/** Performs magic over Gate Document */
protected static MimeType runMagicNumbers(Reader aReader) {
// No reader, nothing to detect
if( aReader == null) return null;
// Prepare to run the magic stuff
String strBuffer = null;
int bufferSize = 2048;
int charReads = 0;
char[] cbuf = new char[bufferSize];
try {
charReads = aReader.read(cbuf,0,bufferSize);
} catch (IOException e){
return null;
}// End try
if (charReads == -1)
// the document is empty
return null;
// Create a string form the buffer and perform some search on it.
strBuffer = new String(cbuf,0,charReads);
// If this fails then surrender
return getTypeFromContent(strBuffer);
}// runMagicNumbers
private static MimeType getTypeFromContent(String aContent){
// change case to cover more variants
aContent = aContent.toLowerCase();
// the mime type we have detected (null to start with)
MimeType detectedMimeType = null;
// the offset of the first match now we use a "first wins" priority
int firstOffset = Integer.MAX_VALUE;
MimeType xmlMime = getMimeType("xml");
// Run the magic numbers test
for(Map.Entry kv : magic2mimeTypeMap.entrySet()) {
// the magic code we are looking for
String magic = kv.getKey().toLowerCase();
// the offset of this code in the content
int offset = aContent.indexOf(magic.toLowerCase());
if(offset != -1 && (offset < firstOffset || (!kv.getValue().equals(xmlMime) && detectedMimeType.equals(xmlMime)))) {
// if the magic code exists in the doc and appears before any others
// than use that mime type
detectedMimeType = kv.getValue();
firstOffset = offset;
}
}
// return the mime type (null if we failed)
return detectedMimeType;
}
/**
* Return the fileSuffix or null if the url doesn't have a file suffix
* If the url is null then the file suffix will be null also
*/
@SuppressWarnings("unused")
private static String getFileSuffix(URL url){
String fileName = null;
String fileSuffix = null;
// GIGO test (garbage in garbage out)
if (url != null){
// get the file name from the URL
fileName = url.getFile();
// tokenize this file name with "." as separator...
// the last token will be the file suffix
StringTokenizer st = new StringTokenizer(fileName,".");
// fileSuffix is the last token
while (st.hasMoreTokens())
fileSuffix = st.nextToken();
// here fileSuffix is the last token
} // End if
return fileSuffix;
}//getFileSufix
/**
* Given a URL, this method returns all the 'file extensions' for the file
* part of the URL. For this purposes, a 'file extension' is any sequence of
* .-separated tokens (such as .gate.xml.gz). The order the extensions are
* returned in is from the most specific (longest) to the most generic
* (shortest) one, e.g. [.gate.xml.gz, .xml.gz, .gz].
*/
private static List getFileSuffixes(URL url){
List res = new LinkedList();
if (url != null){
// get the file name from the URL
String fileName = url.getPath();
int pos = fileName.lastIndexOf('/');
if(pos > 0) fileName = fileName.substring(pos);
pos = fileName.indexOf('.', 1);
while(pos > 0 && pos < fileName.length() - 1) {
res.add(fileName.substring(pos + 1));
pos = fileName.indexOf('.', pos + 1);
}
}
return res;
}
/**
* Find a DocumentFormat implementation that deals with a particular
* MIME type, given that type.
* @param aGateDocument this document will receive as a feature
* the associated Mime Type. The name of the feature is
* MimeType and its value is in the format type/subtype
* @param mimeType the mime type that is given as input
*/
static public DocumentFormat getDocumentFormat(gate.Document aGateDocument,
MimeType mimeType){
FeatureMap aFeatureMap = null;
if(mimeType == null) {
String content = aGateDocument.getContent().toString();
// reduce size for better performance
if(content.length() > 2048) content = content.substring(0, 2048);
mimeType = getTypeFromContent( content );
}
if (mimeType != null){
// If the Gate Document doesn't have a feature map atached then
// We will create and set one.
if(aGateDocument.getFeatures() == null){
aFeatureMap = Factory.newFeatureMap();
aGateDocument.setFeatures(aFeatureMap);
}// end if
aGateDocument.getFeatures().put("MimeType",mimeType.getType() + "/" +
mimeType.getSubtype());
return mimeString2ClassHandlerMap.get(mimeType.getType()
+ "/" + mimeType.getSubtype());
}// end If
return null;
} // getDocumentFormat(aGateDocument, MimeType)
/**
* Find a DocumentFormat implementation that deals with a particular
* MIME type, given the file suffix (e.g. ".txt") that the document came
* from.
* @param aGateDocument this document will receive as a feature
* the associated Mime Type. The name of the feature is
* MimeType and its value is in the format type/subtype
* @param fileSuffix the file suffix that is given as input
*/
static public DocumentFormat getDocumentFormat(gate.Document aGateDocument,
String fileSuffix) {
return getDocumentFormat(aGateDocument, getMimeType(fileSuffix));
} // getDocumentFormat(String)
/**
* Find the DocumentFormat implementation that deals with the given
* MIME type.
*
* @param mimeType the MIME type you want the DocumentFormat for
* @return the DocumentFormat associated with the MIME type or null if
* the MIME type does not have a registered DocumentFormat
*/
public static DocumentFormat getDocumentFormat(MimeType mimeType) {
return mimeString2ClassHandlerMap.get(mimeType.getType() + "/"
+ mimeType.getSubtype());
}
/**
* Find a DocumentFormat implementation that deals with a particular
* MIME type, given the URL of the Document. If it is an HTTP URL, we
* can ask the web server. If it has a recognised file extension, we
* can use that. Otherwise we need to use a map of magic numbers
* to MIME types to guess the type, and then look up the format using the
* type.
* @param aGateDocument this document will receive as a feature
* the associated Mime Type. The name of the feature is
* MimeType and its value is in the format type/subtype
* @param url the URL that is given as input
*/
static public DocumentFormat getDocumentFormat(gate.Document aGateDocument,
URL url) {
return getDocumentFormat(aGateDocument, getMimeType(url));
} // getDocumentFormat(URL)
/** Get the feature set */
@Override
public FeatureMap getFeatures() { return features; }
/** Get the markup elements map */
public Map getMarkupElementsMap() { return markupElementsMap; }
/** Get the element 2 string map */
public Map getElement2StringMap() { return element2StringMap; }
/** Set the markup elements map */
public void setMarkupElementsMap(Map markupElementsMap) {
this.markupElementsMap = markupElementsMap;
}
/** Set the element 2 string map */
public void setElement2StringMap(Map anElement2StringMap) {
element2StringMap = anElement2StringMap;
}
/** Set the features map*/
@Override
public void setFeatures(FeatureMap features){this.features = features;}
/** Set the mime type*/
public void setMimeType(MimeType aMimeType){mimeType = aMimeType;}
/** Gets the mime Type*/
public MimeType getMimeType(){return mimeType;}
/**
* Utility method to get a {@link MimeType} given the type string.
*/
public static MimeType getMimeTypeForString(String typeString) {
return mimeString2mimeTypeMap.get(typeString);
}
/**
* Utility method to get the set of all file suffixes that are registered
* with this class.
*/
public static Set getSupportedFileSuffixes() {
return Collections.unmodifiableSet(suffixes2mimeTypeMap.keySet());
}
//StatusReporter Implementation
public synchronized void removeStatusListener(StatusListener l) {
if (statusListeners != null && statusListeners.contains(l)) {
@SuppressWarnings("unchecked")
Vector v = (Vector) statusListeners.clone();
v.removeElement(l);
statusListeners = v;
}
}
public synchronized void addStatusListener(StatusListener l) {
@SuppressWarnings("unchecked")
Vector v = statusListeners == null ? new Vector(2) : (Vector) statusListeners.clone();
if (!v.contains(l)) {
v.addElement(l);
statusListeners = v;
}
}
protected void fireStatusChanged(String e) {
if (statusListeners != null) {
int count = statusListeners.size();
for (int i = 0; i < count; i++) {
statusListeners.elementAt(i).statusChanged(e);
}
}
}
} // class DocumentFormat
