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rush from group edu.utah.bmi (version 1.0)

RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy. If you wish to cite RuSH in a publication, please use: Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587. The full text can be found at: https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2495498-1.3363244/2495498-1.3363247?timeStamp=1479743941616

Group: edu.utah.bmi Artifact: rush
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Artifact rush
Group edu.utah.bmi
Version 1.0
Last update 23. April 2017
Organization The Department of Biomedical Informatics, University of Utah
URL https://github.com/jianlins/RuSH
License The Apache Software License, Version 2
Dependencies amount 6
Dependencies uimaj-core, uimaj-tools, uimaj-document-annotation, uimafit-core, uimaj-examples, junit,
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jburg from group net.sourceforge.jburg (version 1.10.3)

A bottom-up rewrite machine is a compiler construction tool that is often used in the compiler's back end to convert a tree-structured representation of a program into machine code -- or, in Java's case, bytecode. JBurg can also be used as a general-purpose dynamic programming engine. JBurg is descended from iburg-class BURGs, described in Fraser, Hanson, and Proebsting's paper, "Engineering a Simple, Efficient Code Generator Generator." JBurg brings similar O(N) minimum-cost tree rewriting capabilities to Java, and also allows the programmer to specify transitions between non-terminal states, that are significantly more powerful than iburg's transitive closures: JBurg transformation rules allow the transformation to inject additional program logic, which makes a JBurg specification more like a grammar than like a list of pattern-matching rules.

Group: net.sourceforge.jburg Artifact: jburg
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Artifact jburg
Group net.sourceforge.jburg
Version 1.10.3
Last update 24. February 2016
Organization not specified
URL http://jburg.sourceforge.net/
License Common Public License Version 1.0
Dependencies amount 0
Dependencies No dependencies
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jadex-rules-base from group org.activecomponents.jadex (version 4.0.267)

Jadex Rules is a small lightweight rule engine, which currently employs the well-known Rete algorithm for highly efficient rule matching. Jadex rules is therefore similar to other rule engines like JESS and Drools. Despite the similarities there are also important differences between these systems: * Jadex Rules is very small and intended to be used as component of other software. Even though rules can be specified in a Java dialect as well as (a small variation of) the CLIPS language its primary usage is on the API level. Jadex Rules is currently the core component of the Jadex BDI reasoning engine. * Jadex Rules cleanly separates between state and rule representation. This allows the state implementation as well as the matcher to be flexibly exchanged. Some experiments have e.g. been conducted with a Jena representation. Regarding the matcher, it is planned to support also the Treat algorithm, which has a lower memory footprint than Rete. * Jadex Rules pays close attention to rule debugging. The state as well as the rete engine can be observed at runtime. The rule debugger provides functionalities to execute a rule program stepwise and also use rule breakpoints to stop the execution at those points.

Group: org.activecomponents.jadex Artifact: jadex-rules-base
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Artifact jadex-rules-base
Group org.activecomponents.jadex
Version 4.0.267
Last update 08. September 2022
Organization not specified
URL https://www.activecomponents.org
License GPL-3.0
Dependencies amount 4
Dependencies jadex-util-commons, jadex-util-concurrent, jadex-serialization-xml, antlr-runtime,
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intelligentgraph from group com.inova8 (version 0.9.4)

The IntelligentGraph SAIL offers an extended capability for embedded calculation support within any RDF graph. When enabled as an RDF4J SAIL, it offers calculation functionality as part of the RDF4J engine, on top of any RDF4J repository, using a variety of script engines including JavaScript, Jython, and Groovy. It preserves the SPARQL capability of RDF4J, but with additional capabilities for calculation debugging and tracing. IntelligentGraph includes the PathQL query language. Just as a spreadsheet cell calculation needs to access other cells, an IntelligentGraph calculation needs to access other nodes within the graph. Although full access to the underlying graph is available to any of the scripts, PathQL provides a succinct, and efficient method to access directly or indirectly related nodes. PathQL can either return just the contents of the referenced nodes, or the contents and the path to the referenced nodes. PathQL can also be used standalone to query the IntelligentGraph-enabled RDF database. This supplements, rather than replaces, SPARQL and GraphQL, as it provides graph-path querying rather than graph-pattern querying capabilities to any IntelligentGraph-enabled RDF database. The principles of IntelligentGraph are described here: https://inova8.com/bg_inova8.com/intelligent-graph-knowledge-graph-embedded-analysis/ The full PathQL syntax is described here: https://inova8.com/bg_inova8.com/pathpatternql-intelligently-finding-knowledge-as-a-path-through-a-maze-of-facts/ Using Jupyter as an IDE to IntelligentGraph and RDF4J, shown here: https://inova8.com/bg_inova8.com/intelligentgraph-getting-started/ IntelligentGraph source is here in GitHub: https://github.com/peterjohnlawrence/com.inova8.intelligentgraph IntelligentGraph Docker containers are available here: https://hub.docker.com/repository/docker/inova8/intelligentgraph

Group: com.inova8 Artifact: intelligentgraph
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Artifact intelligentgraph
Group com.inova8
Version 0.9.4
Last update 26. April 2022
Organization inova8
URL https://www.inova8.com
License The Apache License, Version 2.0
Dependencies amount 6
Dependencies commons-cli, rdf4j-runtime, antlr4-runtime, seeq-sdk, jcl-over-slf4j, jericho-html,
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jadex-rules from group org.activecomponents.jadex (version 3.0.117)

Jadex Rules is a small lightweight rule engine, which currently employs the well-known Rete algorithm for highly efficient rule matching. Jadex rules is therefore similar to other rule engines like JESS and Drools. Despite the similarities there are also important differences between these systems: * Jadex Rules is very small and intended to be used as component of other software. Even though rules can be specified in a Java dialect as well as (a small variation of) the CLIPS language its primary usage is on the API level. Jadex Rules is currently the core component of the Jadex BDI reasoning engine. * Jadex Rules cleanly separates between state and rule representation. This allows the state implementation as well as the matcher to be flexibly exchanged. Some experiments have e.g. been conducted with a Jena representation. Regarding the matcher, it is planned to support also the Treat algorithm, which has a lower memory footprint than Rete. * Jadex Rules pays close attention to rule debugging. The state as well as the rete engine can be observed at runtime. The rule debugger provides functionalities to execute a rule program stepwise and also use rule breakpoints to stop the execution at those points.

Group: org.activecomponents.jadex Artifact: jadex-rules
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Artifact jadex-rules
Group org.activecomponents.jadex
Version 3.0.117
Last update 10. May 2020
Organization not specified
URL https://www.activecomponents.org
License GPL-3.0
Dependencies amount 3
Dependencies jadex-commons, jadex-xml, antlr-runtime,
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openimaj from group org.openimaj (version 1.3.10)

OpenIMAJ (Open Intelligent Multimedia in Java) is a collection of libraries and tools for multimedia analysis written in the Java programming language. OpenIMAJ intends to be the first truly complete multimedia analysis library and contains modules for analysing images, videos, text, audio and even webpages. The OpenIMAJ image and video analysis and feature extraction modules contain methods for processing visual content and extracting state-of-the-art features, including SIFT. The OpenIMAJ clustering and nearest-neighbour libraries contain efficient, multi-threaded implementations of clustering algorithms including Hierarchical K-Means and Approximate K-Means. The clustering library makes it possible to easily create visual-bag-of-words representations for images and video with very large vocabularies. The text-analysis modules contain implementations of a statistical language classifier and low-level processing pipeline. A number of modules deal with content creation, including interactive slideshows and animations. The hardware integration modules allow cross-platform integration with devices including webcams, the Microsoft Kinect, and even devices such as GPS's. OpenIMAJ also incorporates a number of tools to enable extremely-large-scale multimedia analysis using a distributed computing approach based on Apache Hadoop.

Group: org.openimaj Artifact: openimaj
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Artifact openimaj
Group org.openimaj
Version 1.3.10
Last update 09. February 2020
Organization The University of Southampton
URL http://www.openimaj.org
License New BSD
Dependencies amount 0
Dependencies No dependencies
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jadex-rules from group net.sourceforge.jadex (version 2.4)

Jadex Rules is a small lightweight rule engine, which currently employs the well-known Rete algorithm for highly efficient rule matching. Jadex rules is therefore similar to other rule engines like JESS and Drools. Despite the similarities there are also important differences between these systems: * Jadex Rules is very small and intended to be used as component of other software. Even though rules can be specified in a Java dialect as well as (a small variation of) the CLIPS language its primary usage is on the API level. Jadex Rules is currently the core component of the Jadex BDI reasoning engine. * Jadex Rules cleanly separates between state and rule representation. This allows the state implementation as well as the matcher to be flexibly exchanged. Some experiments have e.g. been conducted with a Jena representation. Regarding the matcher, it is planned to support also the Treat algorithm, which has a lower memory footprint than Rete. * Jadex Rules pays close attention to rule debugging. The state as well as the rete engine can be observed at runtime. The rule debugger provides functionalities to execute a rule program stepwise and also use rule breakpoints to stop the execution at those points.

Group: net.sourceforge.jadex Artifact: jadex-rules
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Artifact jadex-rules
Group net.sourceforge.jadex
Version 2.4
Last update 20. December 2013
Organization not specified
URL Not specified
License not specified
Dependencies amount 3
Dependencies jadex-commons, jadex-xml, antlr-runtime,
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adp from group de.cit-ec.tcs.alignment (version 3.1.1)

This module contains a more general approach to construct AlignmentAlgorithms by relying on the theoretical concept of Algebraic Dynamic Programming (ADP) as developed by Giegerich et al. ADP defines four ingredients for an alignment algorithm: 1.) A signature that defines the permitted alignment operations. Operations are just function templates with an associated arity, meaning the number of arguments it takes from the left sequence and from the right sequence. In the TCSAlignmentToolbox we have a fixed signature with the following operations: REPLACEMENT(1, 1), DELETION(1, 0), INSERTION(0, 1), SKIPDELETION(1, 0) and SKIPINSERTION(0, 1) 2.) A regular tree grammar that produces alignments, that is: sequences of operations, in a restricted fashion. 3.) An algebra that can translate such trees to a cost. In the TCSAlignmentToolbox this is a Comparator. 4.) A choice function, in case of the TCSAlignmentToolbox: the strict minimum or the soft minimum. An alignment algorithm in the TCSAlignmentToolbox sense of the word then is the combination of choice function and grammar. While we provide hardcoded versions of these combinations in the main package, the adp package allows you to create your own grammars. You can combine them with a choice function by instantiating one of the Algorithm classes provided in this package with a grammar of your choice. For example: AlignmentAlgorithm algo = new SoftADPScoreAlgorithm(my_grammar, comparator); creates an alignment algorithm that implicitly produces all possible alignments your grammar can construct with the given input, translates them to a cost using the algebra/comparator you provided and applies the soft minimum to return the score. This all gets efficient by dynamic programming. Note that there is runtime overhead when using this method in comparison with the hardcoded algorithms. But for complicated grammars this is a much easier way to go. For more information on the theory, please refer to my master's thesis: "Adaptive Affine Sequence Alignment using Algebraic Dynamic Programming"

Group: de.cit-ec.tcs.alignment Artifact: adp
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Artifact adp
Group de.cit-ec.tcs.alignment
Version 3.1.1
Last update 26. October 2018
Organization not specified
URL http://openresearch.cit-ec.de/projects/tcs
License The GNU Affero General Public License, Version 3
Dependencies amount 1
Dependencies algorithms,
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