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This module defines the interfaces for Comparators in the TCS Alignment Toolbox. A Comparator has the purpose of defining the dissimilarity between elements in the input sequences of an Alignment. More specific information on Comparators can be found in the 'Comparator' interface. You can find a lot of helpful standard implementations of Comparators in the comparators-lib module. In the TCS Alignment Toolbox we require the output values of Comparators to lie in the range [0,1]. Many natural dissimilarities on value sets do not meet this criterion, such that additional normalization has to be applied. To that end this package also contains a Normalizer interface for functions that map real values from the range [0, infinity) to the range [0,1]. This package also provides a few convenience implementations of the Comparator interface to make the implementation of custom Comparators simpler, namely: SkipExtendedComparator, ParameterLessSkipExtendedComparator, ComparisonBasedSkipExtendedComparator, and ParameterLessComparisonBasedSkipExtendedComparator. Finally the TCS Alignment Toolbox also provides the means to learn parameters of Comparators. To enable that Comparators must implement the DerivableComparator interface to properly define the parameters that can be learned and the gradient of the dissimilarity with respect to these parameters. Gradients are stored using the Gradient interface as well as some convenience implementations of said interface, namely EmptyGradient, SingletonGradient, ArrayGradient and ListGradient.

Janet Sudoku is a powerful Sudoku Generator and Sudoku Solver library for Java (since jdk 1.5) Android .NET (since 2.0) MONO CLS compliant. Additionally library delivers Janet Sudoku Demo App implementation in a simple form of command line tool, yet highly functional. 1. Sudoku Generator - generate Sudoku puzzles using variety of different methods. 2. Sudoku Solver - Solve any Sudoku puzzle, get the path leading to the correct solution. Check whether unique solution exists. Find all solutions if more than one present. Analyse many built-in examples of Sudoku puzzles or load any other. 3. Manipulate the board by applying transformations not affecting solution existence (i.e. rotation, reflection, permutation, swapping segments, and others). Interact with the library via consisted and well documented API. 4. Janet Sudoku Demo App - use simple, yet highly functional, command line tool to generate, solve evaluate different puzzles.

Randoop is an automatic unit test generator for Java. It automatically creates unit tests for your classes, in JUnit format. Randoop generates unit tests using feedback-directed random test generation. In a nutshell, this technique randomly, but smartly, generates sequences of methods and constructor invocations for the classes under test, and uses the sequences to create tests. Randoop executes the sequences it creates, using the results of the execution to create assertions that capture the behavior or your program and that catch bugs. Randoop has created tests that find previously unkwon errors even in widely-used libraries including Sun and IBM's JDKs. A .NET version of Randoop, used internally at Microsoft, has been used successfully by a team of test engineers to find errors in a core .NET component that has been heavily tested for years. Randoop's combination of randomized test generation and test execution results in a highly effective test generation technique.

Module that defines the HttpChannel API. HttpChannels abstract complex download and upload steps into a simple and easy to use NIO Channel. NIO Channels can be wrapped into an InputStream or OutputStream and used in any way you may find possible to. Aside from that, Channels can be used natively in most next-gen libraries, meaning that you don't even need to wrap anything, just start writing or reading data to or from the channel wth a ByteBuffer. Anyone using the library should try to rely on code from this module only and, only if necessary, on configuration classes that are implementation specific. Relying on any other resource or class is considered an error and should NOT be done. One of the most interesting usages of channels for uploads and download is that you can easily copy data straight from one channel to the other, with less than 10 lines of code! Also, channels allows the implementation of a "tee" mechanism, in which data redden from a single channel can be copied to several other channels on the fly!

GlassFish build depends on properly functioning several custom lifecycle mappings and artifact handlers. Because these are necessary to resolve dependencies and to run "gf:run" goal and etc., it is critical that these extensions be made available to Maven early on during Maven execution. This definition was originally in maven-glassfish-plugin, which was integrated into Maven POM through <plugin>/<extensions>true marking, but after a series of debugging to resolve artifact resolution failure problems, it turns out that that doesn't cause Maven to load components early enough. I tried to circumbent the prolem by also registering the maven-glassfish-plugin as an extension module (via <build>/<extensions/<extension>), but that apparently confuses Maven to no end --- I get build errors like this: [INFO] Internal error in the plugin manager executing goal 'org.apache.maven.plugins:maven-jar-plugin:2.1:jar': Unable to find the mojo 'org.apache.maven.plugins:maven-jar-plugin:2.1:jar' in the plugin 'org.apache.maven.plugins:maven-jar-plugin' This is obviously one of the problematic areas of Maven, so to avoid doing hack over hack, I'm simply moving the component definitions to its own module.

Spring LDAP is a Java library for simplifying LDAP operations, based on the pattern of Spring's JdbcTemplate. The framework relieves the user of common chores, such as looking up and closing contexts, looping through results, encoding/decoding values and filters, and more. The LdapTemplate class encapsulates all the plumbing work involved in traditional LDAP programming, such as creating a DirContext, looping through NamingEnumerations, handling exceptions and cleaning up resources. This leaves the programmer to handle the important stuff - where to find data (DNs and Filters) and what do do with it (map to and from domain objects, bind, modify, unbind, etc.), in the same way that JdbcTemplate relieves the programmer of all but the actual SQL and how the data maps to the domain model. In addition to this, Spring LDAP provides transaction support, a pooling library, exception translation from NamingExceptions to a mirrored unchecked Exception hierarchy, as well as several utilities for working with filters, LDAP paths and Attributes.

GlassFish build depends on properly functioning several custom lifecycle mappings and artifact handlers. Because these are necessary to resolve dependencies and to run "gf:run" goal and etc., it is critical that these extensions be made available to Maven early on during Maven execution. This definition was originally in maven-glassfish-plugin, which was integrated into Maven POM through <plugin>/<extensions>true marking, but after a series of debugging to resolve artifact resolution failure problems, it turns out that that doesn't cause Maven to load components early enough. I tried to circumbent the prolem by also registering the maven-glassfish-plugin as an extension module (via <build>/<extensions/<extension>), but that apparently confuses Maven to no end --- I get build errors like this: [INFO] Internal error in the plugin manager executing goal 'org.apache.maven.plugins:maven-jar-plugin:2.1:jar': Unable to find the mojo 'org.apache.maven.plugins:maven-jar-plugin:2.1:jar' in the plugin 'org.apache.maven.plugins:maven-jar-plugin' This is obviously one of the problematic areas of Maven, so to avoid doing hack over hack, I'm simply moving the component definitions to its own module.