Download JAR files tagged by genes with all dependencies

axie-gene-decoder from group io.github.wqbill (version 1.0.0)

An out-of-the-box decoder to decode Axie genes raw data.

Group: io.github.wqbill Artifact: axie-gene-decoder
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Artifact axie-gene-decoder
Group io.github.wqbill
Version 1.0.0
Last update 29. December 2021
Organization not specified
URL https://github.com/wqbill/axie-gene-decoder
License The Apache License, Version 2.0
Dependencies amount 3
Dependencies jackson-databind, jackson-core, jackson-annotations,
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vibe-core from group org.molgenis (version 5.2.0)

Group: org.molgenis Artifact: vibe-core
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Artifact vibe-core
Group org.molgenis
Version 5.2.0
Last update 06. September 2021
Organization not specified
URL Not specified
License not specified
Dependencies amount 10
Dependencies slf4j-nop, apache-jena-libs, hdt-java-core, hdt-jena, junit-jupiter-api, junit-jupiter-engine, junit-jupiter-params, mockito-core, mockito-junit-jupiter, gson,
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vibe from group org.molgenis (version 5.2.0)

A tool to generate prioritized genes using phenotype information.

Group: org.molgenis Artifact: vibe
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Artifact vibe
Group org.molgenis
Version 5.2.0
Last update 06. September 2021
Organization not specified
URL https://github.com/molgenis/vibe
License GNU Lesser General Public License, Version 3.0
Dependencies amount 0
Dependencies No dependencies
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vibe-cli from group org.molgenis (version 5.2.0)

Group: org.molgenis Artifact: vibe-cli
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Artifact vibe-cli
Group org.molgenis
Version 5.2.0
Last update 06. September 2021
Organization not specified
URL Not specified
License not specified
Dependencies amount 0
Dependencies No dependencies
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jcore-gnp-bioc-reader from group de.julielab (version 2.6.3)

A reader for the BioC format used by GNormPlus. Reads the text and the annotations, both species and genes.

Group: de.julielab Artifact: jcore-gnp-bioc-reader
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Artifact jcore-gnp-bioc-reader
Group de.julielab
Version 2.6.3
Last update 08. December 2022
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-bnp-bioc-reader
License not specified
Dependencies amount 8
Dependencies slf4j-api, jcore-descriptor-creator, pengyifan-bioc, jcore-types, junit-jupiter-engine, assertj-core, jcore-utilities, costosys,
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gene-species-assignment from group de.julielab (version 1.0.0)

The task that is the subject of this project is the assignment of taxonomy identifiers to mentions of genes in text documents. The base for the assignment are mostly the mentions of species in the same document.

Group: de.julielab Artifact: gene-species-assignment
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Artifact gene-species-assignment
Group de.julielab
Version 1.0.0
Last update 03. December 2022
Organization JULIE Lab Jena, Germany
URL Not specified
License BSD-2-Clause
Dependencies amount 8
Dependencies gene-mapper-experimental-base, gene-candidate-retrieval, jcore-types, junit-jupiter-engine, assertj-core, lucene-suggest, ruta-core, jcore-utilities,
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bridgedb-bundle from group org.bridgedb (version 3.1.1)

BridgeDb is a framework for finding and mapping equivalent database identifiers. It has many facets: it is both a framework, live services, and are identifier mapping files for genes, proteins, and metabolites.

Group: org.bridgedb Artifact: bridgedb-bundle
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Artifact bridgedb-bundle
Group org.bridgedb
Version 3.1.1
Last update 18. December 2023
Organization BridgeDb project
URL http://www.bridgedb.org/
License Apache License, Version 2.0
Dependencies amount 0
Dependencies No dependencies
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org.bridgedb.rdf from group org.bridgedb (version 3.1.1)

Group: org.bridgedb Artifact: org.bridgedb.rdf
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Artifact org.bridgedb.rdf
Group org.bridgedb
Version 3.1.1
Last update 18. December 2023
Organization not specified
URL Not specified
License not specified
Dependencies amount 12
Dependencies org.bridgedb.utils, org.bridgedb.bio, rdf4j-rio-api, rdf4j-repository-sail, rdf4j-sail-memory, rdf4j-sail-nativerdf, rdf4j-rio-turtle, rdf4j-rio-rdfxml, rdf4j-rio-testsuite, rdf4j-rio-trig, rdf4j-rio-n3, rdf4j-rio-trix,
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org.bridgedb.uri.ws.client from group org.bridgedb (version 3.1.1)

Group: org.bridgedb Artifact: org.bridgedb.uri.ws.client
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Artifact org.bridgedb.uri.ws.client
Group org.bridgedb
Version 3.1.1
Last update 18. December 2023
Organization not specified
URL Not specified
License not specified
Dependencies amount 3
Dependencies org.bridgedb.uri.api, org.bridgedb.uri.ws.core, org.bridgedb.ws.client,
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org.bridgedb.uri.sql from group org.bridgedb (version 3.1.1)

Group: org.bridgedb Artifact: org.bridgedb.uri.sql
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Artifact org.bridgedb.uri.sql
Group org.bridgedb
Version 3.1.1
Last update 18. December 2023
Organization not specified
URL Not specified
License not specified
Dependencies amount 4
Dependencies org.bridgedb.sql, org.bridgedb.rdf, org.bridgedb.uri.api, mysql-connector-java,
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