Download JAR files tagged by gnormplus with all dependencies

jcore-gnormplus-ae from group de.julielab (version 2.6.10)

Wrapper for the JULIE Lab variant of the GNormPlus gene ID mapper.

Group: de.julielab Artifact: jcore-gnormplus-ae
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Artifact jcore-gnormplus-ae
Group de.julielab
Version 2.6.10
Last update 20. May 2024
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-gnormplus-ae
License BSD 2-Clause
Dependencies amount 10
Dependencies julielab-gnormplus, jcore-gnp-bioc-writer, jcore-gnp-bioc-reader, jcore-xmi-db-reader, jcore-xml-db-reader, jcore-pmc-db-reader, slf4j-api, jcore-types, jcore-descriptor-creator, junit-jupiter-engine,
There are maybe transitive dependencies!

jcore-gnp-bioc-writer from group de.julielab (version 2.6.4)

Writes CAS documents into the BioC XML format used by the gene tagger and normalizer GNormPlus.

Group: de.julielab Artifact: jcore-gnp-bioc-writer
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Artifact jcore-gnp-bioc-writer
Group de.julielab
Version 2.6.4
Last update 14. February 2024
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-gnp-bioc-writer
License not specified
Dependencies amount 7
Dependencies slf4j-api, jcore-types, pengyifan-bioc, jcore-utilities, junit-jupiter-engine, assertj-core, jcore-descriptor-creator,
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jcore-gnp-bioc-reader from group de.julielab (version 2.6.3)

A reader for the BioC format used by GNormPlus. Reads the text and the annotations, both species and genes.

Group: de.julielab Artifact: jcore-gnp-bioc-reader
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Artifact jcore-gnp-bioc-reader
Group de.julielab
Version 2.6.3
Last update 08. December 2022
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-bnp-bioc-reader
License not specified
Dependencies amount 8
Dependencies slf4j-api, jcore-descriptor-creator, pengyifan-bioc, jcore-types, junit-jupiter-engine, assertj-core, jcore-utilities, costosys,
There are maybe transitive dependencies!

jcore-gnormplus-pubmed-db-reader from group de.julielab (version 2.6.2)

This is the GNormPlus XML DB multiplier base component that is contained in the JCoRe GNormPlus AE project in jcore-base complemented by the pubmed XML mapping file. This is a drop-in replacement for the PubMed DB Multiplier that runs GNormPlus after the XML data has been added to the CAS. Note that running GNormPlus requires the presence of the GNormPlus resources and external programs in the working directory of the pipeline.

Group: de.julielab Artifact: jcore-gnormplus-pubmed-db-reader
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Artifact jcore-gnormplus-pubmed-db-reader
Group de.julielab
Version 2.6.2
Last update 14. February 2024
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-gnormplus-pubmed-db-reader
License BSD 2-Clause
Dependencies amount 5
Dependencies jcore-gnormplus-ae, slf4j-api, jcore-descriptor-creator, jcore-types, junit-jupiter-engine,
There are maybe transitive dependencies!

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