Download JAR files tagged by have with all dependencies

TimoCloud is a Minecraft server/proxy management system ("Cloud System"). It will care about keeping online enough servers/proxies of every kind. But it's more than that. Thank to its algorithms, you'll never have to care again about servers or resources. TimoCloud automatically chooses servers with low CPU usage and enough available RAM to start your instances. And its integrated Flow-System makes updating templates easier than ever before: Edit one file in a server template, and the update will automatically be deployed to all bases (a.k.a. "Wrapper"). But of course, only the changed files will get updated.

JPA Security is an Access Control Solution for the Java Persistence API (JPA). With JPA Security your access control can be performed in the database. You may query the database for all objects of a certain type and will receive only the objects you have read access for. This filtering is performed in the database. Unaccessible queried objects will not be loaded into memory. JPA Security enables you to completely remove security-related code from your code-base. All access control may be configured via Annotations or XML. With JPA Security you do not have to change your access control paradigm (but maybe you want to, when you see the great capability of JPA Security). You even can mix access control paradigms easily. JPA Security is not designed to replace current security solutions, but to extend them. It integrates smoothly into the security mechanisms of the Java EE Platform, but may be used with third-party frameworks like Spring Security or in Java SE, too. With the extensibility of JPA Security it is easy to provide your own access control paradigm, access rules storage or login mechanism.

fastutil extends the Java Collections Framework by providing type-specific maps, sets, lists, and queues with a small memory footprint and fast operations; it provides also big (64-bit) arrays, sets, and lists, sorting algorithms, fast, practical I/O classes for binary and text files, and facilities for memory mapping large files. This jar (fastutil-core.jar) contains data structures based on integers, longs, doubles, and objects, only; fastutil.jar contains all classes. If you have both jars in your dependencies, this jar should be excluded.

This project has a lot of business classes to work with genes and related named entities. Genes are part of a GeneDocument and may have gold IDs as well as mapped/predicted IDs. Another large part are species because most (all?) gene ID databases are species specific. So there are also classes or members to represent species mentions and the assignment of species IDs (taxonomy IDs) to genes. There is little to no business logic herein. This project is only useful as building block in other projects dealing with species assignment, gene ID mapping or similar efforts.

Java implementation of the Ziggurat algorithm for generating Gaussian distributed pseudorandom numbers. The Ziggurat algorithm is significantly faster than the more commonly encountered Polar method, and has some other desirable statistical properties. The ZigguratGaussian class is a Java port of the GNU Scientific Library's C implementation (Voss, 2005) of the Ziggurat method. In porting to Java, we have made several optimizations, the details of which can be found in the source code comments, which highlights any differences between this Java implementation and the C implementation on which it is based. This package also includes an implementation of the Polar Method, included to enable comparing speed advantage of the Ziggurat algorithm.