Download JAR files tagged by instance with all dependencies

Maven plugin for small application config support. Allows you to define configuration for your application at one place and generate config files and java class. Configuration can be instantiate by var args, file config or environment variables or combination of all. ISSUES: -v potomkovi mam rucne psanou pomocnou property, ta se nesmi dostat do property descriptoru, pak je tam s klicem null -pokud reloadArgs byposition vrati null, vyhodit hned vyjimku - confDef = byOrder.get(iPos++); TODO: - boolean opts -- is/get -- option without value true - make def enum public - static instance to access from everywhere without pass an instance -static enum Def -more executions with different configuration has conflict in options and names

The crypto4j library provides a simple and pluggable crypto abstraction library for Java, including both cryptographic primitives and the artifacts defined in the JOSE standard. This library separates the cryptographic primitives from the JOSE artifacts. The library uses the algorithms available through JCA (JCE). The implementations of the cryptographic primitives provided in this library rely on the standard JCA implementation, and can be configured and extended through the JCA mechanisms. The JOSE portion of the library allows custom extensions by either replacing the provided JOSE artifact implementations with custom implementations, or by adding new JOSE artifacts, for instance in form of additional algorithms, which is particularly useful in case that the JOSE standard is updated or in case custom extensions to the JOSE standard should be implemented. The implementations available in this library generally come in two variants: a standard implementation of the primitives and advanced algorithms, and a high-performance implementation that takes advantage of implementation patterns that do not compromise cryprographic security, but speed up the overall processing time.

PowerMock allows you to unit test code normally regarded as untestable. For instance it is possible to mock static methods, remove static initializers, allow mocking without dependency injection and more. PowerMock works by bytecode manipulation. PowerMock also contain some utilities that gives you easier access to an objects internal state. PowerMock can be used to test otherwise untestable code and also to achieve a cleaner separation between test and production code.

Package for loading a directory containing MRI data in NIfTI format. The directory to be loaded must contain as many subdirectories as there are classes of MRI data. Each subdirectory name will be used as the class label for the corresponding .nii files in that subdirectory. (This is the same strategy as the one used by WEKA's TextDirectoryLoader.) Currently, the package only reads volume information for the first time slot from each .nii file. The readDoubleVol(short ttt) method from the Nifti1Dataset class (http://niftilib.sourceforge.net/java_api_html/Nifti1Dataset.html) is used to read the data for each volume into a sparse WEKA instance (with ttt=0). For an LxMxN volume (the dimensions must be the same for each .nii file in the directory!), the order of values in the generated instance is [(z_1, y_1, x_1), ..., (z_1, y_1, x_L), (z_1, y_2, x_1), ..., (z_1, y_M, x_L), (z_2, y_1, x_1), ..., (z_N, y_M, x_L)]. If the volume is an image, then only x and y coordinates are used.

The Jenkins Maven Plugin allows to use the Jenkins CLI (command line interface) from within a Maven build. It allows the execution of any command supported by the CLI, see https://wiki.jenkins-ci.org/display/JENKINS/Jenkins+CLI for further information. Therefore, it downloads the current jenkins-cli.jar from ${project.ciManagement.url}/jnlpJars/jenkins-cli.jar and uses that artifact for interacting with the Jenkins server. The architecture of the Jenkins Maven Plugin follows the UNIX philosophy "do one thing and do it well": it does not provide any logic for specific tasks, for instance creating job configuration files. This can be done with another, more appropriate plugin and its result can then be specified as stdin to the Jenkins Maven Plugin.

Skeletal implementation of interface javax.lang.model.util.Types, plus concrete realization backed by core Java Reflection API, akin to JEP 119. This module implements those methods in interface javax.lang.model.util.Types that pertain to the Java type system, plus it provides a method for resolving formal type parameters to actual type arguments. These methods have no equivalent in the Java Reflection API. The abstract skeletal implementation in this module is meant to be specialized for a particular javax.lang.model implementation. The abstraction makes this module well-suited to be used in projects that contain javax.lang.model as part of their domain model (for instance, implementations of alternative languages on top of the JVM).

An instance filter that collapses instances with a common grouping ID value into a single instance. Useful for converting transactional data into a format that Weka's association rule learners can handle. IMPORTANT: assumes that the incoming batch of instances has been sorted on the grouping attribute. The values of nominal attributes are converted to indicator attributes. These can be either binary (with f and t values) or unary with missing values used to indicate absence. The later is Weka's old market basket format, which is useful for Apriori. Numeric attributes can be aggregated within groups by computing the average, sum, minimum or maximum.

This class implements a single conjunctive rule learner that can predict for numeric and nominal class labels. A rule consists of antecedents "AND"ed together and the consequent (class value) for the classification/regression. In this case, the consequent is the distribution of the available classes (or mean for a numeric value) in the dataset. If the test instance is not covered by this rule, then it's predicted using the default class distributions/value of the data not covered by the rule in the training data.This learner selects an antecedent by computing the Information Gain of each antecendent and prunes the generated rule using Reduced Error Prunning (REP) or simple pre-pruning based on the number of antecedents. For classification, the Information of one antecedent is the weighted average of the entropies of both the data covered and not covered by the rule. For regression, the Information is the weighted average of the mean-squared errors of both the data covered and not covered by the rule. In pruning, weighted average of the accuracy rates on the pruning data is used for classification while the weighted average of the mean-squared errors on the pruning data is used for regression.

A filter that applies the LOF (Local Outlier Factor) algorithm to compute an outlier score for each instance in the data. Can use multiple cores/cpus to speed up the LOF computation for large datasets. Nearest neighbor search methods and distance functions are pluggable. For more information, see: Markus M. Breunig, Hans-Peter Kriegel, Raymond T. Ng, Jorg Sander (2000). LOF: Identifying Density-Based Local Outliers. ACM SIGMOD Record. 29(2):93-104.