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jcore-medline-reader from group de.julielab (version 2.6.0)
Leveraging the JCoRe XML Reader, this project employs a Medline-enabled mapping file to map Medline XML
documents to CAS instances. The input is a directory of single XML files, each containing exactly one XML
MedlineCitation. The XML format is the one used by NCBI when downloading Medline documents in large batches from
the NCBI FTP server. However, the component currently expects single documents instead of whole
MedlineCitationSets containing sets of MedlineCitations.
Artifact jcore-medline-reader
Group de.julielab
Version 2.6.0
Last update 18. December 2022
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-medline-reader
License BSD-2-Clause
Dependencies amount 3
Dependencies jcore-descriptor-creator, jcore-xml-reader, junit-jupiter-engine,
There are maybe transitive dependencies!
Group de.julielab
Version 2.6.0
Last update 18. December 2022
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-medline-reader
License BSD-2-Clause
Dependencies amount 3
Dependencies jcore-descriptor-creator, jcore-xml-reader, junit-jupiter-engine,
There are maybe transitive dependencies!
jcore-linnaeus-species-ae-genera-species-proxies-dicts from group de.julielab (version 2.6.0)
This project is a resource for the JCoRe Linnaeus Annotator. The dictionaries contained herein are used
for the recognition of concrete species names in text, e.g. "human", "mouse", "n.
furzeri", "c. elegans" etc as well as species hints, i.e. indirect clues to a species like the
word "patient" which most likely refers to a human. Additionally to such rather clear proxies, this
project also includes a small dictionary containing maximum-frequency-proxies for genus expressions like "Drosophila"
which will be mapped to "D. melanogaster". For the task of only finding concrete species names in
text, there is the project jcore-linnaeus-species-ae-species-dict.
Group: de.julielab Artifact: jcore-linnaeus-species-ae-genera-species-proxies-dicts
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Artifact jcore-linnaeus-species-ae-genera-species-proxies-dicts
Group de.julielab
Version 2.6.0
Last update 18. December 2022
Organization not specified
URL Not specified
License BSD-2-Clause
Dependencies amount 2
Dependencies jcore-linnaeus-species-ae-proxies-dict, junit-jupiter-engine,
There are maybe transitive dependencies!
Group de.julielab
Version 2.6.0
Last update 18. December 2022
Organization not specified
URL Not specified
License BSD-2-Clause
Dependencies amount 2
Dependencies jcore-linnaeus-species-ae-proxies-dict, junit-jupiter-engine,
There are maybe transitive dependencies!
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