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nohr from group pt.unl.fct.novalincs (version 2.0.0)

NoHR (Nova Hybrid Reasoner) is a plug-in for the ontology editor Protégé that allows its users to query knowledge bases composed of both an Ontology in OWL 2 EL or QL and a set of Reasoning Rules. Using a top-down reasoning approach, which means that only the part of the ontology and rules that is relevant for the query is actually evaluated, NoHR respectively combines the capabilities of ELK for OWL 2 EL and a dedicated direct translation for OWL 2 QL with the rule engine XSB Prolog to deliver very fast interactive response times. NoHR is the first hybrid reasoner of its kind for Protégé. NoHR is also distributed as an API.

Group: pt.unl.fct.novalincs Artifact: nohr
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Artifact nohr
Group pt.unl.fct.novalincs
Version 2.0.0
Last update 01. October 2015
Organization NOVA Laboratory of Computer Science and Informatics (NOVA LINCS)
URL http://centria.di.fct.unl.pt/nohr
License Mozilla Public License Version 2.0
Dependencies amount 2
Dependencies elk-owlapi, interprolog,
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kiabora from group fr.lirmm.graphik (version 0.9.0)

Group: fr.lirmm.graphik Artifact: kiabora
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Artifact kiabora
Group fr.lirmm.graphik
Version 0.9.0
Last update 21. September 2015
Organization GraphIK (INRIA - LIRMM)
URL Not specified
License not specified
Dependencies amount 7
Dependencies graal-util, graal-core, graal-io-dlgp, graal-rules-analyser, commons-lang3, jcommander, logback-classic,
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graal-store-api from group fr.lirmm.graphik (version 0.9.0)

Group: fr.lirmm.graphik Artifact: graal-store-api
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Artifact graal-store-api
Group fr.lirmm.graphik
Version 0.9.0
Last update 21. September 2015
Organization INRIA
URL Not specified
License not specified
Dependencies amount 1
Dependencies graal-core,
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graal-io-api from group fr.lirmm.graphik (version 0.9.0)

Group: fr.lirmm.graphik Artifact: graal-io-api
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Artifact graal-io-api
Group fr.lirmm.graphik
Version 0.9.0
Last update 21. September 2015
Organization INRIA
URL Not specified
License not specified
Dependencies amount 2
Dependencies graal-core, graal-util,
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graal-io-dlgp1 from group fr.lirmm.graphik (version 0.8.7)

Group: fr.lirmm.graphik Artifact: graal-io-dlgp1
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Artifact graal-io-dlgp1
Group fr.lirmm.graphik
Version 0.8.7
Last update 03. September 2015
Organization INRIA
URL Not specified
License not specified
Dependencies amount 4
Dependencies graal-core, graal-io-api, dlgp-parser, logback-classic,
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metaCost from group nz.ac.waikato.cms.weka (version 1.0.3)

This metaclassifier makes its base classifier cost-sensitive using the method specified in Pedro Domingos: MetaCost: A general method for making classifiers cost-sensitive. In: Fifth International Conference on Knowledge Discovery and Data Mining, 155-164, 1999. This classifier should produce similar results to one created by passing the base learner to Bagging, which is in turn passed to a CostSensitiveClassifier operating on minimum expected cost. The difference is that MetaCost produces a single cost-sensitive classifier of the base learner, giving the benefits of fast classification and interpretable output (if the base learner itself is interpretable). This implementation uses all bagging iterations when reclassifying training data (the MetaCost paper reports a marginal improvement when only those iterations containing each training instance are used in reclassifying that instance).

Group: nz.ac.waikato.cms.weka Artifact: metaCost
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Artifact metaCost
Group nz.ac.waikato.cms.weka
Version 1.0.3
Last update 06. February 2013
Organization University of Waikato, Hamilton, NZ
URL http://weka.sourceforge.net/doc.packages/metaCost
License GNU General Public License 3
Dependencies amount 1
Dependencies weka-dev,
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rush from group edu.utah.bmi.nlp (version 3.0)

RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy. If you wish to cite RuSH in a publication, please use: Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587. The full text can be found at: https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2495498-1.3363244/2495498-1.3363247?timeStamp=1479743941616 This version allows defining section scopes for sentence segmentation.

Group: edu.utah.bmi.nlp Artifact: rush
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Artifact rush
Group edu.utah.bmi.nlp
Version 3.0
Last update 10. February 2018
Organization The Department of Biomedical Informatics, University of Utah
URL https://github.com/jianlins/RuSH
License The Apache Software License, Version 2
Dependencies amount 3
Dependencies nlp-core, fastner, junit-repeat-rule,
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rush from group edu.utah.bmi (version 1.0)

RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy. If you wish to cite RuSH in a publication, please use: Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587. The full text can be found at: https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2495498-1.3363244/2495498-1.3363247?timeStamp=1479743941616

Group: edu.utah.bmi Artifact: rush
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Artifact rush
Group edu.utah.bmi
Version 1.0
Last update 23. April 2017
Organization The Department of Biomedical Informatics, University of Utah
URL https://github.com/jianlins/RuSH
License The Apache Software License, Version 2
Dependencies amount 6
Dependencies uimaj-core, uimaj-tools, uimaj-document-annotation, uimafit-core, uimaj-examples, junit,
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oneClassClassifier from group nz.ac.waikato.cms.weka (version 1.0.4)

Performs one-class classification on a dataset. Classifier reduces the class being classified to just a single class, and learns the datawithout using any information from other classes. The testing stage will classify as 'target'or 'outlier' - so in order to calculate the outlier pass rate the dataset must contain informationfrom more than one class. Also, the output varies depending on whether the label 'outlier' exists in the instances usedto build the classifier. If so, then 'outlier' will be predicted, if not, then the label willbe considered missing when the prediction does not favour the target class. The 'outlier' classwill not be used to build the model if there are instances of this class in the dataset. It cansimply be used as a flag, you do not need to relabel any classes. For more information, see: Kathryn Hempstalk, Eibe Frank, Ian H. Witten: One-Class Classification by Combining Density and Class Probability Estimation. In: Proceedings of the 12th European Conference on Principles and Practice of Knowledge Discovery in Databases and 19th European Conference on Machine Learning, ECMLPKDD2008, Berlin, 505--519, 2008.

Group: nz.ac.waikato.cms.weka Artifact: oneClassClassifier
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3 downloads
Artifact oneClassClassifier
Group nz.ac.waikato.cms.weka
Version 1.0.4
Last update 14. May 2013
Organization University of Waikato, Hamilton, NZ
URL http://weka.sourceforge.net/doc.packages/oneClassClassifier
License GNU General Public License 3
Dependencies amount 1
Dependencies weka-dev,
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sirix-core from group com.github.johanneslichtenberger.sirix (version 0.1.0)

Sirix is a versioned, treebased storage system. It provides an ID-less diff-algorithm to import differences between two versions. Furthermore an ID-based diff-algorithm facilitates the comparison of versions stored within Sirix. A GUI with several visualizations for comparing these versions visually is available to aid an analyst. Versions are stored using well known versioning strategies (full, incremental, differential). The architecture is especially well suited for flash-disks because of a COW-principle. In the future we aim to provide throughout security as well as a replaced page-structure to speedup our architecture. A brackit(.org) binding will enable XQuery and the XQuery Update Facility. Temporal XPath axis and possibly diff-functions will help analysts to gain quick knowledge from the stored data.

Group: com.github.johanneslichtenberger.sirix Artifact: sirix-core
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Artifact sirix-core
Group com.github.johanneslichtenberger.sirix
Version 0.1.0
Last update 27. September 2012
Organization not specified
URL Not specified
License not specified
Dependencies amount 1
Dependencies snappy-java,
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