Download JAR files tagged by pubmed with all dependencies
reciter-pubmed-model from group edu.cornell.weill.reciter (version 2.0.3)
Group: edu.cornell.weill.reciter Artifact: reciter-pubmed-model
Show all versions Show documentation Show source
Show all versions Show documentation Show source
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jcore-pmc-reader from group de.julielab (version 2.6.1)
A UIMA reader for the Pubmed Central NXML format.
0 downloads
Artifact jcore-pmc-reader
Group de.julielab
Version 2.6.1
Last update 18. November 2022
Organization JULIE Lab Jena, Germany
URL Not specified
License BSD-2-Clause
Dependencies amount 8
Dependencies slf4j-api, julie-xml-tools, jcore-types, snakeyaml, assertj-core, uima-ducc-user, jcore-descriptor-creator, junit,
There are maybe transitive dependencies!
Group de.julielab
Version 2.6.1
Last update 18. November 2022
Organization JULIE Lab Jena, Germany
URL Not specified
License BSD-2-Clause
Dependencies amount 8
Dependencies slf4j-api, julie-xml-tools, jcore-types, snakeyaml, assertj-core, uima-ducc-user, jcore-descriptor-creator, junit,
There are maybe transitive dependencies!
konnector from group net.nprod (version 0.1.34)
format-pubmed from group uk.ac.gate.plugins (version 8.5)
0 downloads
jcore-xml-mapper from group de.julielab (version 2.6.2)
1 downloads
jcore-biosem-ae from group de.julielab (version 2.6.2)
A UIMA wrapper around the BioSem Event Extractor from the University of Amsterdam.
http://www.ncbi.nlm.nih.gov/pubmed/22859502
0 downloads
Artifact jcore-biosem-ae
Group de.julielab
Version 2.6.2
Last update 04. January 2024
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-biosem-ae
License BSD-2-Clause
Dependencies amount 4
Dependencies commons-lang3, biosem-event-extractor, jcore-types, junit,
There are maybe transitive dependencies!
Group de.julielab
Version 2.6.2
Last update 04. January 2024
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-biosem-ae
License BSD-2-Clause
Dependencies amount 4
Dependencies commons-lang3, biosem-event-extractor, jcore-types, junit,
There are maybe transitive dependencies!
jcore-topic-indexing-ae from group de.julielab (version 2.6.1)
Labels LDA Topics estimated from project julielab-topic-modeling to infer document topics for PubMed
articles
Group: de.julielab Artifact: jcore-topic-indexing-ae
Show all versions Show documentation Show source
Show all versions Show documentation Show source
0 downloads
Artifact jcore-topic-indexing-ae
Group de.julielab
Version 2.6.1
Last update 18. December 2022
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-topic-labeling-ae
License BSD-2-Clause
Dependencies amount 9
Dependencies jcore-descriptor-creator, assertj-core, slf4j-api, jcore-types, commons-configuration2, uimaj-document-annotation, jcore-utilities, julielab-topic-modeling, junit-jupiter-engine,
There are maybe transitive dependencies!
Group de.julielab
Version 2.6.1
Last update 18. December 2022
Organization JULIE Lab Jena, Germany
URL https://github.com/JULIELab/jcore-base/tree/master/jcore-topic-labeling-ae
License BSD-2-Clause
Dependencies amount 9
Dependencies jcore-descriptor-creator, assertj-core, slf4j-api, jcore-types, commons-configuration2, uimaj-document-annotation, jcore-utilities, julielab-topic-modeling, junit-jupiter-engine,
There are maybe transitive dependencies!
fastcontext from group edu.utah.bmi.nlp (version 2.0.1.0-jdk11)
FastContext is an optimized Java implementation of ConText algorithm
(https://www.ncbi.nlm.nih.gov/pubmed/23920642). It runs two orders of magnitude faster than previous two
popular implementations: JavaConText and GeneralConText.
Version 2.0 includes UIMA wrapper
0 downloads
Artifact fastcontext
Group edu.utah.bmi.nlp
Version 2.0.1.0-jdk11
Last update 06. August 2024
Organization not specified
URL Not specified
License not specified
Dependencies amount 1
Dependencies nlp-core,
There are maybe transitive dependencies!
Group edu.utah.bmi.nlp
Version 2.0.1.0-jdk11
Last update 06. August 2024
Organization not specified
URL Not specified
License not specified
Dependencies amount 1
Dependencies nlp-core,
There are maybe transitive dependencies!
jcore-pubmed-db-reader from group de.julielab (version 2.6.1)
An instantiation of the jcore-db-reader that uses the jcore-xml-mapper to retrieve and parse PubMed XML
from a PostgreSQL database. The XML format of retrieved documents is expected to follow the PubMed/MEDLINE XML
schema
that was used beginning from 2017. I.e. the root document of a document must be PubmedArticle and not,
as it was for MEDLINE until 2017, MedlineCitation.
Artifact jcore-pubmed-db-reader
Group de.julielab
Version 2.6.1
Last update 20. February 2024
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-pubmed-db-reader
License BSD-2-Clause
Dependencies amount 3
Dependencies jcore-xml-db-reader, jcore-descriptor-creator, junit-jupiter-engine,
There are maybe transitive dependencies!
Group de.julielab
Version 2.6.1
Last update 20. February 2024
Organization JULIE Lab, Germany
URL https://github.com/JULIELab/jcore-projects/tree/master/jcore-pubmed-db-reader
License BSD-2-Clause
Dependencies amount 3
Dependencies jcore-xml-db-reader, jcore-descriptor-creator, junit-jupiter-engine,
There are maybe transitive dependencies!
jcore-gnormplus-pubmed-db-reader from group de.julielab (version 2.6.2)
0 downloads
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