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master-pom from group com.github.secdec.astam-correlator (version 1.3.8)

ThreadFix is a software vulnerability aggregation and management system that reduces the time it takes to fix software vulnerabilities. ThreadFix imports the results from dynamic, static and manual testing to provide a centralized view of software security defects across development teams and applications. The system allows companies to correlate testing results and streamline software remediation efforts by simplifying feeds to software issue trackers. By auto generating application firewall rules, this tool allows organizations to continue remediation work uninterrupted. ThreadFix empowers managers with vulnerability trending reports that show progress over time, giving them justification for their efforts. ThreadFix is developed and maintained by Denim Group, Ltd (http://www.denimgroup.com) For information about commercial support and other services, contact Denim Group about ThreadFix http://www.denimgroup.com/threadfix/ The ASTAM Correlator is a branch of the public Community Edition of the ThreadFix software. This branch is maintained by Secure Decisions (http://www.securedecisions.com), a Division of Applied Visions, Inc (http://www.avi.com).

Group: com.github.secdec.astam-correlator Artifact: master-pom
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Artifact master-pom
Group com.github.secdec.astam-correlator
Version 1.3.8
Last update 15. March 2022
Organization Denim Group, Ltd.; Secure Decisions, A Division of Applied Visions, Inc.
URL http://www.github.com/secdec/astam-correlator
License Mozilla Public License v2.0
Dependencies amount 0
Dependencies No dependencies
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sirix-parent from group io.sirix (version 0.9.3)

Sirix is a temporal storage system effectively and efficiently storing snapshots of time varying (currently semi-structured) data taking full advantage of flash based drives as for instance SSDs. We not only provide several ways of navigating the tree-structure of a single revision, we also support navigation in time. Furthermore we provide a novel storage technique called sliding snapshot to circumvent intermitant full dump snapshots to fast track their in-memory reconstruction and thus we avoiding write peaks and having to read long chains of page fragments/increments/deltas. Sirix uses copy-on-write (COW) as well as an append-only storage making it an ideal candidate for flash based drives while not dropping support for erstwhile disks.

Group: io.sirix Artifact: sirix-parent
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Artifact sirix-parent
Group io.sirix
Version 0.9.3
Last update 29. July 2019
Organization not specified
URL https://sirix.io
License New BSD
Dependencies amount 14
Dependencies jcommander, aspectjrt, slf4j-api, perfidix, xmlunit, logback-classic, logback-core, guice, gson, guava, guava-testlib, jsr305, brackit, caffeine,
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dbvolution7 from group nz.co.gregs (version 1.0.0)

Advanced Library to Remove Object Relational Impedance. DBvolution translates all database concepts into Object Oriented concepts, allowing you to spend all your time writing Java rather than fixing broken and awkward SQL. DBvolution transforms your schema into classes, reduces the database configuration to sparse annotations on the classes, and allows querying directly from the classes. Queries are created inside your java code and takes as little as one line for a multi-table outer join. Retrieving the rows from the query is only one more method call. Dozens of SQL functions are available without leaving your Java code and use chaining to build complex expressions easily. Transactions are encapsulated into a thread-like API, allowing you to write complex database interactions in complete safety. The queries performed by DBvolution are always available for debugging and checking by DBAs before release. There are examples in nz.co.gregs.dbvolution.examples, and documentation at http://dbvolution.gregs.co.nz.

Group: nz.co.gregs Artifact: dbvolution7
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Artifact dbvolution7
Group nz.co.gregs
Version 1.0.0
Last update 27. May 2019
Organization Gregory Graham
URL http://dbvolution.gregs.co.nz
License Commercial License
Dependencies amount 26
Dependencies mysql-connector-java, h2, mysql-connector-mxj, postgresql, reflections, commons-logging, dbvolution-eclipse, jung-visualization, jung-graph-impl, sqlite-jdbc, commons-codec, nuodb-jdbc, derby, derbyclient, jts, joda-time, simmetrics-core, jtds, mssql-jdbc, annotations, jsr305, jackson-dataformat-yaml, jackson-databind, jbcrypt, commons-lang3, commons-crypto,
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dbvolution from group nz.co.gregs (version 1.0.5)

Advanced Library to Remove Object Relational Impedance. DBvolution translates all database concepts into Object Oriented concepts, allowing you to spend all your time writing Java rather than fixing broken and awkward SQL. DBvolution transforms your schema into classes, reduces the database configuration to sparse annotations on the classes, and allows querying directly from the classes. Queries are created inside your java code and takes as little as one line for a multi-table outer join. Retrieving the rows from the query is only one more method call. Dozens of SQL functions are available without leaving your Java code and use chaining to build complex expressions easily. Transactions are encapsulated into a thread-like API, allowing you to write complex database interactions in complete safety. The actions performed by DBvolution are always available for debugging and checking by DBAs before release. There are examples in nz.co.gregs.dbvolution.examples, and documentation at http://dbvolution.gregs.co.nz and http://sourceforge.net/p/dbvolution/blog/

Group: nz.co.gregs Artifact: dbvolution
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Artifact dbvolution
Group nz.co.gregs
Version 1.0.5
Last update 18. August 2018
Organization not specified
URL http://dbvolution.gregs.co.nz
License Non-commercial License
Dependencies amount 16
Dependencies mysql-connector-java, h2, mysql-connector-mxj, postgresql, reflections, commons-logging, dbvolution-eclipse, jung-visualization, jung-graph-impl, sqlite-jdbc, commons-codec, nuodb-jdbc, derby, derbyclient, jts, joda-time,
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rush from group edu.utah.bmi.nlp (version 3.0)

RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy. If you wish to cite RuSH in a publication, please use: Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587. The full text can be found at: https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2495498-1.3363244/2495498-1.3363247?timeStamp=1479743941616 This version allows defining section scopes for sentence segmentation.

Group: edu.utah.bmi.nlp Artifact: rush
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Artifact rush
Group edu.utah.bmi.nlp
Version 3.0
Last update 10. February 2018
Organization The Department of Biomedical Informatics, University of Utah
URL https://github.com/jianlins/RuSH
License The Apache Software License, Version 2
Dependencies amount 3
Dependencies nlp-core, fastner, junit-repeat-rule,
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threadfix-entities from group com.denimgroup.threadfix (version 2.5)

ThreadFix is a software vulnerability aggregation and management system that reduces the time it takes to fix software vulnerabilities. ThreadFix imports the results from dynamic, static and manual testing to provide a centralized view of software security defects across development teams and applications. The system allows companies to correlate testing results and streamline software remediation efforts by simplifying feeds to software issue trackers. By auto generating application firewall rules, this tool allows organizations to continue remediation work uninterrupted. ThreadFix empowers managers with vulnerability trending reports that show progress over time, giving them justification for their efforts. ThreadFix is developed and maintained by Denim Group, Ltd (http://www.denimgroup.com) For information about commercial support and other services, contact Denim Group about ThreadFix http://www.denimgroup.com/resources-threadfix/

Group: com.denimgroup.threadfix Artifact: threadfix-entities
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1 downloads
Artifact threadfix-entities
Group com.denimgroup.threadfix
Version 2.5
Last update 28. August 2017
Organization Denim Group, Ltd.
URL https://github.com/denimgroup/threadfix
License Mozilla Public License, Version 2.0
Dependencies amount 13
Dependencies jsr305, commons-lang3, log4j, validation-api, hibernate-core, jericho-html, hibernate-validator, jackson-annotations, jackson-mapper-asl, joda-time, cron-utils, commons-validator, jackson-core,
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rush from group edu.utah.bmi (version 1.0)

RuSH is an efficient, reliable, and easy adaptable rule-based sentence segmentation solution. It is specifically designed to handle the telegraphic written text in clinical note. It leverages a nested hash table to execute simultaneous rule processing, which reduces the impact of the rule-base growth on execution time and eliminates the effect of rule order on accuracy. If you wish to cite RuSH in a publication, please use: Jianlin Shi ; Danielle Mowery ; Kristina M. Doing-Harris ; John F. Hurdle.RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA Annu Symp Proc. 2016: 1587. The full text can be found at: https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2495498-1.3363244/2495498-1.3363247?timeStamp=1479743941616

Group: edu.utah.bmi Artifact: rush
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Artifact rush
Group edu.utah.bmi
Version 1.0
Last update 23. April 2017
Organization The Department of Biomedical Informatics, University of Utah
URL https://github.com/jianlins/RuSH
License The Apache Software License, Version 2
Dependencies amount 6
Dependencies uimaj-core, uimaj-tools, uimaj-document-annotation, uimafit-core, uimaj-examples, junit,
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org.pojava.datetime from group org.pojava (version 3.0.0)

POJava DateTime is a simple, light-weight Java-based API for parsing and manipulating dates. It parses dates from most languages and formats out of the box without having to specify which format is expected. Defaults such as time zones, and whether to interpret an internationally ambiguous date like "03/06/2014" as DMY order or MDY order are inferred by system time zone and locale and stored in a default config object that can be replaced or overridden. Multiple languages for month names are supported without any additional configuration needed. The net effect the default parser for a server in Paris would have a different automatic configuration from a server in New York. Throw a random local date at either, and it'll parse it as expected. If your server supports customers from multiple locales and time zones, then each can be specified when parsing a date/time to resolve any ambiguities.

Group: org.pojava Artifact: org.pojava.datetime
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Artifact org.pojava.datetime
Group org.pojava
Version 3.0.0
Last update 11. March 2014
Organization not specified
URL http://www.pojava.org
License The Apache Software License, Version 2.0
Dependencies amount 0
Dependencies No dependencies
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msdk-db-mona from group io.github.msdk (version 0.0.27)

MassBank of America (MoNA), is an auto curating repository for storing, comparing and querying mass spectra of chemical compounds. It is metadata centric and it was designed to allow easy integration into other tools by utilize its REST based application programming interface. At the current time it contains over 200k predicted and 40k unique experimental mass spectra and their associated metadata. The predicted spectra were obtained by utilizing the lipid blast library and the experimental spectra were acquired from 30 different facilities all over the world, including several major research facilities in the United States and Japan. MoNA is utilizing the InChI Key as unique identifier for chemicals and is designed for easy scalability and expendability. This is realized by utilizing common applications like nginx, grails, AngularJS, postgresSQL and tomcat. MoNA is currently integrated in applications like MSDial, BinBase, MZMine and the statistics package R. This was accomplished by utilizing its REST based API, which is also utilized by its main AngularJS based web interface. We consider MoNA to be highly useful for crosslinking mass spectra in publications, identification of unknowns and integration in data acquisition software. This package provides you with access to the REST api of the main MoNA installation.

Group: io.github.msdk Artifact: msdk-db-mona
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Artifact msdk-db-mona
Group io.github.msdk
Version 0.0.27
Last update 28. July 2019
Organization not specified
URL Not specified
License not specified
Dependencies amount 5
Dependencies msdk-datamodel, minimal-json, commons-lang, jersey-media-json-jackson, jersey-client,
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msdk-mona from group io.github.msdk (version 0.0.1)

MassBank of America (MoNA), is an auto curating repository for storing, comparing and querying mass spectra of chemical compounds. It is metadata centric and it was designed to allow easy integration into other tools by utilize its REST based application programming interface. At the current time it contains over 200k predicted and 40k unique experimental mass spectra and their associated metadata. The predicted spectra were obtained by utilizing the lipid blast library and the experimental spectra were acquired from 30 different facilities all over the world, including several major research facilities in the United States and Japan. MoNA is utilizing the InChI Key as unique identifier for chemicals and is designed for easy scalability and expendability. This is realized by utilizing common applications like nginx, grails, AngularJS, postgresSQL and tomcat. MoNA is currently integrated in applications like MSDial, BinBase, MZMine and the statistics package R. This was accomplished by utilizing its REST based API, which is also utilized by its main AngularJS based web interface. We consider MoNA to be highly useful for crosslinking mass spectra in publications, identification of unknowns and integration in data acquisition software. This package provides you with access to the REST api of the main MoNA installation.

Group: io.github.msdk Artifact: msdk-mona
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Artifact msdk-mona
Group io.github.msdk
Version 0.0.1
Last update 24. November 2015
Organization not specified
URL Not specified
License not specified
Dependencies amount 5
Dependencies msdk-datamodel, minimal-json, commons-lang, jersey-media-json-jackson, jersey-client,
There are maybe transitive dependencies!



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