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A Java API for high-throughput sequencing data (HTS) formats

There is a newer version: 4.1.3

package htsjdk.beta.plugin.reads;

import htsjdk.beta.plugin.HtsCodec;
import htsjdk.beta.plugin.HtsContentType;

/**
 * Base class for all {@link HtsContentType#ALIGNED_READS} codecs.
 */
public interface ReadsCodec extends HtsCodec {

    @Override
    default HtsContentType getContentType() { return HtsContentType.ALIGNED_READS; }

}