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Applications and software libraries for evolutionary biology and comparative genomics research
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// $Id:
//
// FORESTER -- software libraries and applications
// for evolutionary biology research and applications.
//
// Copyright (C) 2008-2009 Christian M. Zmasek
// Copyright (C) 2008-2009 Burnham Institute for Medical Research
// All rights reserved
//
// This library is free software; you can redistribute it and/or
// modify it under the terms of the GNU Lesser General Public
// License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
//
// This library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
// Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public
// License along with this library; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
//
// Contact: phylosoft @ gmail . com
// WWW: https://sites.google.com/site/cmzmasek/home/software/forester
package org.forester.species;
import org.forester.util.ForesterUtil;
public class BasicSpecies implements Species {
final private String _species_id;
public BasicSpecies( final String species_id ) {
if ( ForesterUtil.isEmpty( species_id ) ) {
throw new IllegalArgumentException( "attempt to create new species from empty or null string" );
}
_species_id = species_id.trim();
}
@Override
public int compareTo( final Species species ) {
if ( this == species ) {
return 0;
}
return getSpeciesId().toLowerCase().compareTo( species.getSpeciesId().toLowerCase() );
}
@Override
public boolean equals( final Object o ) {
if ( this == o ) {
return true;
}
else if ( o == null ) {
throw new IllegalArgumentException( "attempt to check [" + this.getClass() + "] equality to null" );
}
else if ( o.getClass() != this.getClass() ) {
throw new IllegalArgumentException( "attempt to check [" + this.getClass() + "] equality to " + o + " ["
+ o.getClass() + "]" );
}
else {
return getSpeciesId().equals( ( ( Species ) o ).getSpeciesId() );
}
}
/* (non-Javadoc)
* @see org.forester.surfacing.Species#getSpeciesId()
*/
@Override
public String getSpeciesId() {
return _species_id;
}
@Override
public int hashCode() {
return getSpeciesId().hashCode();
}
@Override
public String toString() {
return getSpeciesId();
}
}