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Download pattern JAR 6.0.0 with all dependencies

BioPAX Pattern Search library. Also, converts BioPAX model to SIF (simple binary interactions) text format.

Files of the artifact pattern version 6.0.0 from the group org.biopax.paxtools.

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Artifact pattern
Group org.biopax.paxtools
Version 6.0.0
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, normalizer,
There are maybe transitive dependencies!

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Source code of pattern version 6.0.0

META-INF

META-INF.META-INF.MANIFEST.MF

META-INF.maven.org.biopax.paxtools.pattern

META-INF.maven.org.biopax.paxtools.pattern.META-INF.maven.org.biopax.paxtools.pattern.pom.properties

META-INF.maven.org.biopax.paxtools.pattern.META-INF.maven.org.biopax.paxtools.pattern.pom.xml

org.biopax.paxtools.pattern

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.Constraint

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.MappedConst

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.Match

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.Pattern

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.PatternBox

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.Searcher

org.biopax.paxtools.pattern.constraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.AND

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ActivityConstraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ActivityModificationChangeConstraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ConBox

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ConstraintAdapter

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ConstraintChain

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ControlToControllerER

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ControlsNotParticipant

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ConversionSide

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.Empty

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.Equality

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.Field

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.FieldOfMultiple

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.HasAnID

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.IDConstraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.InterToPartER

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.LinkedPE

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ModificationChangeConstraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.MultiPathConstraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.NOT

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.NonUbique

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.OR

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.PEChainsIntersect

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.Participant

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.ParticipatesInConv

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.PathConstraint

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.RelatedControl

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.SelfOrThis

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.Size

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.Type

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.XOR

org.biopax.paxtools.pattern.constraint.org.biopax.paxtools.pattern.constraint.package.html

org.biopax.paxtools.pattern.example

org.biopax.paxtools.pattern.example.org.biopax.paxtools.pattern.example.DeltaFeatureExtractor

org.biopax.paxtools.pattern.miner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.AbstractSIFMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.BlacklistGenerator

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.BlacklistGenerator2

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.BlacklistGenerator3

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CSCOBothControllerAndParticipantMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CSCOButIsParticipantMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CSCOThroughBindingSmallMoleculeMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CSCOThroughControllingSmallMoleculeMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CSCOThroughDegradationMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CatalysisPrecedesMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ChemicalAffectsThroughBindingMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ChemicalAffectsThroughControlMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CommonIDFetcher

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ConsumptionControlledByMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsDegradationIndirectMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsExpressionMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsExpressionWithConvMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsPhosphorylationMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsProductionOfMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsStateChangeDetailedMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsStateChangeOfMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsTransportMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ControlsTransportOfChemicalMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.CustomFormat

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.Dialog

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.DirectedRelationMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ExtendedSIFWriter

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.InComplexWithMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.InteractsWithMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.Miner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.MinerAdapter

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.NeighborOfMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.OutputColumn

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.ReactsWithMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.RelatedGenesOfInteractionsMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SIFEnum

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SIFInteraction

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SIFMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SIFSearcher

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SIFToText

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SIFType

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.SimpleIDFetcher

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.UbiquitousIDMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.UsedToProduceMiner

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.blacklist-names.txt

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.package.html

org.biopax.paxtools.pattern.miner.org.biopax.paxtools.pattern.miner.sif-guide.html

org.biopax.paxtools.pattern

org.biopax.paxtools.pattern.org.biopax.paxtools.pattern.package.html

org.biopax.paxtools.pattern.util

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.AdjacencyMatrix

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.Blacklist

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.ChemicalNameNormalizer

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.DifferentialModificationUtil

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.PhysicalEntityChain

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.ProgressWatcher

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.RelType

org.biopax.paxtools.pattern.util.org.biopax.paxtools.pattern.util.package.html

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