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    • Download org.biopax.paxtools JAR files with all dependencies


    json-converter from group org.biopax.paxtools (version 5.1.0)

    Converts BioPAX model/file to or from JSON-LD format

    Group: org.biopax.paxtools Artifact: json-converter
    Download json-converter.jar (5.1.0)
     

    Artifact json-converter
    Group org.biopax.paxtools
    Version 5.1.0

    9 downloads

    json-converter from group org.biopax.paxtools (version 5.0.1)

    Converts BioPAX model/file to or from JSON-LD format

    Group: org.biopax.paxtools Artifact: json-converter
    Download json-converter.jar (5.0.1)
     

    Artifact json-converter
    Group org.biopax.paxtools
    Version 5.0.1

    3 downloads

    json-converter from group org.biopax.paxtools (version 5.0.0)

    Converts BioPAX model/file to or from JSON-LD format

    Group: org.biopax.paxtools Artifact: json-converter
    Download json-converter.jar (5.0.0)
     

    Artifact json-converter
    Group org.biopax.paxtools
    Version 5.0.0

    2 downloads

    paxtools-console from group org.biopax.paxtools (version 5.1.0)

    Paxtools Console Application and Examples

    Group: org.biopax.paxtools Artifact: paxtools-console
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    Artifact paxtools-console
    Group org.biopax.paxtools
    Version 5.1.0

    1 downloads

    paxtools-trove from group org.biopax.paxtools (version 4.3.1)

    Trove4j based collections provider for BioPAX model

    Group: org.biopax.paxtools Artifact: paxtools-trove
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    Download paxtools-trove.jar (4.3.1)
     

    Artifact paxtools-trove
    Group org.biopax.paxtools
    Version 4.3.1

    0 downloads

    paxtools-core from group org.biopax.paxtools (version 6.0.0)

    Paxtools core library includes the BioPAX object model and interfaces, the default implementation and extras: reflection-based class factories and property editors/accessors, some inverse properties (e.g., xrefOf, componentOf), traversal and file (I/O) utilities.

    Group: org.biopax.paxtools Artifact: paxtools-core
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    Download paxtools-core.jar (6.0.0)
     

    Artifact paxtools-core
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    paxtools-query from group org.biopax.paxtools (version 6.0.0)

    BioPAX graph-theoretic querying - for finding paths between molecules, or identifying molecules that are reachable through specific paths, using the BioPAX pathway data model.

    Group: org.biopax.paxtools Artifact: paxtools-query
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    Download paxtools-query.jar (6.0.0)
     

    Artifact paxtools-query
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    psimi-converter from group org.biopax.paxtools (version 6.0.0)

    Converts PSI-MI or PCI-MITAB v2.5 files to BioPAX

    Group: org.biopax.paxtools Artifact: psimi-converter
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    Download psimi-converter.jar (6.0.0)
     

    Artifact psimi-converter
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    paxtools-trove from group org.biopax.paxtools (version 6.0.0)

    Trove4j based collections provider for BioPAX model

    Group: org.biopax.paxtools Artifact: paxtools-trove
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    Download paxtools-trove.jar (6.0.0)
     

    Artifact paxtools-trove
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    sbgn-converter from group org.biopax.paxtools (version 6.0.0)

    To convert a BioPAX L3 model to SBGN-ML (SBGN PD), and optionally align.

    Group: org.biopax.paxtools Artifact: sbgn-converter
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    Download sbgn-converter.jar (6.0.0)
     

    Artifact sbgn-converter
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    pattern from group org.biopax.paxtools (version 6.0.0)

    BioPAX Pattern Search library. Also, converts BioPAX model to SIF (simple binary interactions) text format.

    Group: org.biopax.paxtools Artifact: pattern
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    Download pattern.jar (6.0.0)
     

    Artifact pattern
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    paxtools-console from group org.biopax.paxtools (version 6.0.0)

    Paxtools Console Application and Examples

    Group: org.biopax.paxtools Artifact: paxtools-console
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    Download paxtools-console.jar (6.0.0)
     

    Artifact paxtools-console
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    json-converter from group org.biopax.paxtools (version 6.0.0)

    Converts BioPAX model/file to or from JSON-LD format

    Group: org.biopax.paxtools Artifact: json-converter
    Show documentation Show source 
    Download json-converter.jar (6.0.0)
     

    Artifact json-converter
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    gsea-converter from group org.biopax.paxtools (version 6.0.0)

    Converts data to the GESA (.gmt) format.

    Group: org.biopax.paxtools Artifact: gsea-converter
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    Download gsea-converter.jar (6.0.0)
     

    Artifact gsea-converter
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads

    normalizer from group org.biopax.paxtools (version 6.0.0)

    A BioPAX Normalizer and modified off-line MiriamLink (MIRIAM, EBI, OLS)

    Group: org.biopax.paxtools Artifact: normalizer
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    Download normalizer.jar (6.0.0)
     

    Artifact normalizer
    Group org.biopax.paxtools
    Version 6.0.0

    0 downloads


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