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• ReadDataHolder.java

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org.broadinstitute.gatk.nativebindings.pairhmm.ReadDataHolder Maven / Gradle / Ivy

package org.broadinstitute.gatk.nativebindings.pairhmm;

/**
 * Struct used to copy references to byteArrays from reads to the PairHMM compute kernel.
 */
public final class ReadDataHolder {
    public byte[] readBases = null;
    public byte[] readQuals = null;
    public byte[] insertionGOP = null;
    public byte[] deletionGOP = null;
    public byte[] overallGCP = null;
}