
org.broadinstitute.hellbender.engine.BasicReference Maven / Gradle / Ivy
The newest version!
package org.broadinstitute.hellbender.engine;
import org.broadinstitute.hellbender.utils.SimpleInterval;
/**
* A source of reference base calls.
*/
public interface BasicReference {
/**
* Get the reference base calls in the specified window.
* The calls are encoded as ASCII characters, 1 per byte.
* The are no guarantees about upper or lower case, or particular values that may or may not be present.
*/
byte[] getBases( final SimpleInterval window );
}
© 2015 - 2025 Weber Informatics LLC | Privacy Policy