All Downloads are FREE. Search and download functionalities are using the official Maven repository.

org.broadinstitute.hellbender.engine.GATKDataSource Maven / Gradle / Ivy

The newest version!
package org.broadinstitute.hellbender.engine;

import org.broadinstitute.hellbender.utils.SimpleInterval;

import java.util.Iterator;

/**
 * A GATKDataSource is something that can be iterated over from start to finish
 * and/or queried by genomic interval. It is not necessarily file-based.
 *
 * @param  Type of data in the data source
 */
public interface GATKDataSource extends Iterable {
    Iterator query(final SimpleInterval interval);
}




© 2015 - 2025 Weber Informatics LLC | Privacy Policy