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package org.broadinstitute.hellbender.utils.read;
import htsjdk.samtools.ValidationStringency;
/**
* Constants for use with the GATKRead interface
*/
public final class ReadConstants {
private ReadConstants(){}
/**
* Value used as the default validation stringency for all read input
*/
public static ValidationStringency DEFAULT_READ_VALIDATION_STRINGENCY = ValidationStringency.SILENT;
/**
* Value used to represent the absence of a defined start/end position in a read
*/
public static final int UNSET_POSITION = 0;
/**
* Value used to represent the absence of a defined contig in a read
*/
public static final String UNSET_CONTIG = "*";
/**
* Value used to represent the absence of a mapping quality in a read
*/
public static final int NO_MAPPING_QUALITY = 0;
/**
* Value used for String representation of a non-existent sequence
*/
public static final String NULL_SEQUENCE_STRING = "*";
}
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