org.clulab.reach.FriesEntry.scala Maven / Gradle / Ivy
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package org.clulab.reach
import ai.lum.nxmlreader.NxmlDocument
case class FriesEntry(
name: String,
chunkId: String,
sectionId: String,
sectionName: String,
isTitle: Boolean,
text: String
) {
override def toString(): String = s"$chunkId\t$sectionName\t$sectionId\t${if(isTitle) 1 else 0}\t$text"
def this(nxmldoc: NxmlDocument) = this(
name = nxmldoc.pmc,
// we are using the PMC as the chunk-id because we now read
// the whole paper in a single chunk
chunkId = nxmldoc.pmc,
sectionId = nxmldoc.standoff.path,
sectionName = "",
false,
nxmldoc.standoff.text
)
def this(paperId: String, nxmldoc: NxmlDocument) = this(
name = paperId,
// we are using the PMC as the chunk-id because we now read
// the whole paper in a single chunk
chunkId = nxmldoc.pmc,
sectionId = nxmldoc.standoff.path,
sectionName = "",
isTitle = false,
text = nxmldoc.standoff.text
)
}
object FriesEntry {
def mkFriesEntry(paperID: String, text: String): FriesEntry = {
FriesEntry(
name = paperID,
chunkId = paperID,
sectionId = "",
sectionName = "",
isTitle = false,
text
)
}
}
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