org.opencb.cellbase.lib.builders.CellBaseBuilder Maven / Gradle / Ivy

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/*
 * Copyright 2015-2020 OpenCB
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package org.opencb.cellbase.lib.builders;

import org.opencb.cellbase.core.serializer.CellBaseSerializer;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

/**
 * Created by imedina on 30/08/14.
 */
public abstract class CellBaseBuilder {

    protected CellBaseSerializer serializer;

    protected Logger logger;

    public CellBaseBuilder(CellBaseSerializer serializer) {
        logger = LoggerFactory.getLogger(this.getClass());

        this.serializer = serializer;
        //this.serializer.open();
    }

    public abstract void parse() throws Exception;

    public void disconnect() {
        try {
            serializer.close();
        } catch (Exception e) {
            logger.error("Disconnecting serializer: " + e.getMessage());
        }
    }

}