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Download cellbase-lib JAR 6.2.1 with all dependencies


Files of the artifact cellbase-lib version 6.2.1 from the group org.opencb.cellbase.

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Artifact cellbase-lib
Group org.opencb.cellbase
Version 6.2.1
Last update 13. September 2024
Tags: databases into database projects cellbase query several biological many integrates plus nosql
Organization not specified
URL Not specified
License not specified
Dependencies amount 6
Dependencies cellbase-core, commons-datastore-mongodb, jetty-util-ajax, jersey-client, poi-ooxml, log4j-core,
There are maybe transitive dependencies!
There is a newer version: 6.3.0
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Source code of cellbase-lib version 6.2.1

META-INF
META-INF.META-INF.MANIFEST.MF
META-INF.maven.org.opencb.cellbase.cellbase-lib
META-INF.maven.org.opencb.cellbase.cellbase-lib.META-INF.maven.org.opencb.cellbase.cellbase-lib.pom.properties
META-INF.maven.org.opencb.cellbase.cellbase-lib.META-INF.maven.org.opencb.cellbase.cellbase-lib.pom.xml
.mongodb-indexes.json
org.opencb.cellbase.lib
org.opencb.cellbase.lib.org.opencb.cellbase.lib.EtlCommons
org.opencb.cellbase.lib.org.opencb.cellbase.lib.MongoDBCollectionConfiguration
org.opencb.cellbase.lib.builders
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.CaddAllAnnotationBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.CaddScoreBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.CellBaseBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.ConservationBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.DbSnpBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.DrugParser
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.EnsemblGeneBuilderIndexer
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneBuilderIndexer
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneBuilderUtils
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GeneExpressionAtlasBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.GenomeSequenceFastaBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.InteractionBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.OntologyBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.PharmGKBBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.ProteinBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.PubMedBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RefSeqGeneBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RefSeqGeneBuilderIndexer
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RegulatoryFeatureBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RegulatoryRegionBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RepeatsBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RevelScoreBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.RocksDbManager
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.SpliceBuilder
org.opencb.cellbase.lib.builders.org.opencb.cellbase.lib.builders.VariationBuilder
org.opencb.cellbase.lib.builders.clinical.variant
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinVarIndexer
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinVarParser
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinicalIndexer
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.ClinicalVariantBuilder
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.CosmicBuilder
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.CosmicIndexer
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.DOCMIndexer
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.GwasIndexer
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.HGMDIndexer
org.opencb.cellbase.lib.builders.clinical.variant.org.opencb.cellbase.lib.builders.clinical.variant.IARCTP53Indexer
org.opencb.cellbase.lib.builders.formats
org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.Cadd
org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.ConservedRegionFeature
org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.GeneExpressionAtlas
org.opencb.cellbase.lib.builders.formats.org.opencb.cellbase.lib.builders.formats.Genome
org.opencb.cellbase.lib.builders.utils
org.opencb.cellbase.lib.builders.utils.org.opencb.cellbase.lib.builders.utils.GenomeSequenceUtils
org.opencb.cellbase.lib.db
org.opencb.cellbase.lib.db.org.opencb.cellbase.lib.db.MongoDBManager
org.opencb.cellbase.lib.download
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.AbstractDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.CaddDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.ClinicalDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.CoreDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.DownloadFile
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.DownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.Downloader
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.GeneDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.GenomeDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.MissenseScoresDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.OntologyDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.PharmGKBDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.ProteinDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.PubMedDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.RegulationDownloadManager
org.opencb.cellbase.lib.download.org.opencb.cellbase.lib.download.VariationDownloadManager
org.opencb.cellbase.lib.impl.core
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.CellBaseCoreDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.CellBaseDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.ClinicalMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.GeneMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.GenomeMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MetaMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MissenseVariationFunctionalScoreMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.MongoDBAdaptorFactory
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.OntologyMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.PharmacogenomicsMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.ProteinMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.PublicationMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.RegulationMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.ReleaseMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.RepeatsMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.SnpMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.SpliceScoreMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.TranscriptMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.VariantMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.org.opencb.cellbase.lib.impl.core.XRefMongoDBAdaptor
org.opencb.cellbase.lib.impl.core.converters
org.opencb.cellbase.lib.impl.core.converters.org.opencb.cellbase.lib.impl.core.converters.VariantConverter
org.opencb.cellbase.lib.indexer
org.opencb.cellbase.lib.indexer.org.opencb.cellbase.lib.indexer.IndexManager
org.opencb.cellbase.lib.install
org.opencb.cellbase.lib.install.org.opencb.cellbase.lib.install.InstallManager
org.opencb.cellbase.lib.install.org.opencb.cellbase.lib.install.MongoDBShardUtils
org.opencb.cellbase.lib.iterator
org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.ApiKeyFilteredVariantIterator
org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.CellBaseIterator
org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.CellBaseMongoDBIterator
org.opencb.cellbase.lib.iterator.org.opencb.cellbase.lib.iterator.VariantMongoDBIterator
org.opencb.cellbase.lib.loader
org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.CellBaseLoader
org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.CellBaseTypeConverter
org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.LoadRunner
org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.LoaderException
org.opencb.cellbase.lib.loader.org.opencb.cellbase.lib.loader.MongoDBCellBaseLoader
org.opencb.cellbase.lib.managers
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.AbstractManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.AggregationApi
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.CellBaseManagerFactory
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.ClinicalManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.DataReleaseManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.FeatureApi
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.FileManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.GeneManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.GenomeManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.MetaManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.OntologyManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.PharmacogenomicsManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.ProteinManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.PublicationManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.RegulatoryManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.RepeatsManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.TfbsManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.TranscriptManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.VariantManager
org.opencb.cellbase.lib.managers.org.opencb.cellbase.lib.managers.XrefManager
org.opencb.cellbase.lib.monitor
org.opencb.cellbase.lib.monitor.org.opencb.cellbase.lib.monitor.Monitor
org.opencb.cellbase.lib.variant
org.opencb.cellbase.lib.variant.org.opencb.cellbase.lib.variant.VariantAnnotationUtils
org.opencb.cellbase.lib.variant.annotation
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.CellBaseNormalizerSequenceAdaptor
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeBNDCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeCNVGainCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeDeletionCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeGenericRegionCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeInsertionCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeMNVCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.ConsequenceTypeSNVCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.UnsupportedURLVariantFormat
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.VariantAnnotationCalculator
org.opencb.cellbase.lib.variant.annotation.org.opencb.cellbase.lib.variant.annotation.VariantAnnotator
org.opencb.cellbase.lib.variant.annotation.futures
org.opencb.cellbase.lib.variant.annotation.futures.org.opencb.cellbase.lib.variant.annotation.futures.FuturePharmacogenomicsAnnotator
org.opencb.cellbase.lib.variant.annotation.futures.org.opencb.cellbase.lib.variant.annotation.futures.FutureSnpAnnotator
org.opencb.cellbase.lib.variant.annotation.futures.org.opencb.cellbase.lib.variant.annotation.futures.FutureSpliceScoreAnnotator
org.opencb.cellbase.lib.variant.hgvs
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.BuildingComponents
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.CdnaCoord
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsCalculator
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsProtein
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsProteinCalculator
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.HgvsTranscriptCalculator
org.opencb.cellbase.lib.variant.hgvs.org.opencb.cellbase.lib.variant.hgvs.TranscriptUtils




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