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    Download opencga-catalog JAR 3.3.0 with all dependencies


    Files of the artifact opencga-catalog version 3.3.0 from the group org.opencb.opencga.

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    Artifact opencga-catalog
    Group org.opencb.opencga
    Version 3.3.0
    Last update 15. October 2024
    Tags: implements projects data genomic opencga analysis platform
    Organization not specified
    URL Not specified
    License not specified
    Dependencies amount 41
    Dependencies opencga-core, commons-lib, commons-datastore-core, commons-datastore-mongodb, commons-datastore-solr, biodata-formats, biodata-models, biodata-tools, commons-collections4, commons-lang3, commons-io, slf4j-api, log4j-core, log4j-api, jackson-core, jackson-databind, jackson-dataformat-yaml, jackson-core-asl, jjwt-api, solr-solrj, adal4j, microsoft-graph, annotations, json-smart, guava, gson, reflections, nimbus-jose-jwt, mongodb-driver-core, mongodb-driver-sync, bson, azure-client-authentication, avro, httpclient, mail, oauth2-oidc-sdk, htsjdk, azure-client-runtime, azure, kubernetes-client, azure-batch,
    There are maybe transitive dependencies!
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    Source code of opencga-catalog version 3.3.0

    META-INF
    META-INF.META-INF.MANIFEST.MF
    META-INF.maven.org.opencb.opencga.opencga-catalog
    META-INF.maven.org.opencb.opencga.opencga-catalog.META-INF.maven.org.opencb.opencga.opencga-catalog.pom.properties
    META-INF.maven.org.opencb.opencga.opencga-catalog.META-INF.maven.org.opencb.opencga.opencga-catalog.pom.xml
    .catalog-indexes.txt
    org.opencb.opencga.catalog.audit
    org.opencb.opencga.catalog.audit.org.opencb.opencga.catalog.audit.AuditFilterOption
    org.opencb.opencga.catalog.auth.authentication
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.AuthenticationManager
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.AzureADAuthenticationManager
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.CatalogAuthenticationManager
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.JwtManager
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.LDAPAuthenticationManager
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.MySSLSocketFactory
    org.opencb.opencga.catalog.auth.authentication.org.opencb.opencga.catalog.auth.authentication.SSOAuthenticationManager
    org.opencb.opencga.catalog.auth.authentication.azure
    org.opencb.opencga.catalog.auth.authentication.azure.org.opencb.opencga.catalog.auth.authentication.azure.AuthenticationFactory
    org.opencb.opencga.catalog.auth.authentication.azure.org.opencb.opencga.catalog.auth.authentication.azure.AuthenticationProvider
    org.opencb.opencga.catalog.auth.authorization
    org.opencb.opencga.catalog.auth.authorization.org.opencb.opencga.catalog.auth.authorization.AuthorizationDBAdaptor
    org.opencb.opencga.catalog.auth.authorization.org.opencb.opencga.catalog.auth.authorization.AuthorizationDBAdaptorFactory
    org.opencb.opencga.catalog.auth.authorization.org.opencb.opencga.catalog.auth.authorization.AuthorizationManager
    org.opencb.opencga.catalog.auth.authorization.org.opencb.opencga.catalog.auth.authorization.AuthorizationMongoDBAdaptorFactory
    org.opencb.opencga.catalog.auth.authorization.org.opencb.opencga.catalog.auth.authorization.CatalogAuthorizationManager
    org.opencb.opencga.catalog.db
    org.opencb.opencga.catalog.db.org.opencb.opencga.catalog.db.AbstractDBAdaptor
    org.opencb.opencga.catalog.db.org.opencb.opencga.catalog.db.DBAdaptorFactory
    org.opencb.opencga.catalog.db.api
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.AnnotationSetDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.AuditDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.ClinicalAnalysisDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.CohortDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.CoreDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.DBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.DBIterator
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.FamilyDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.FileDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.IndividualDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.InterpretationDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.JobDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.MetaDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.MigrationDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.NoteDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.OrganizationDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.PanelDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.ProjectDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.SampleDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.StudyDBAdaptor
    org.opencb.opencga.catalog.db.api.org.opencb.opencga.catalog.db.api.UserDBAdaptor
    org.opencb.opencga.catalog.db.mongodb
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.AnnotationMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.AuditMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.AuthorizationMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.AuthorizationMongoDBUtils
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.CatalogMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.ClinicalAnalysisMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.CohortMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.FamilyMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.FileMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.IndividualMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.InterpretationMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.JobMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.MetaMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.MigrationMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.MongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.MongoDBAdaptorFactory
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.MongoDBUtils
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.NoteMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.OrganizationMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.OrganizationMongoDBAdaptorFactory
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.PanelMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.ProjectMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.SampleMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.SnapshotVersionedMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.StudyMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.UserMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.org.opencb.opencga.catalog.db.mongodb.VersionedMongoDBAdaptor
    org.opencb.opencga.catalog.db.mongodb.converters
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.AnnotableConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.AnnotationConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.ClinicalAnalysisConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.CohortConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.FamilyConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.FileConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.IndividualConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.InterpretationConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.JobConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.MigrationConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.NoteConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.OpenCgaMongoConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.OrganizationConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.PanelConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.ProjectConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.SampleConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.StudyConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.UserConverter
    org.opencb.opencga.catalog.db.mongodb.converters.org.opencb.opencga.catalog.db.mongodb.converters.VariableSetConverter
    org.opencb.opencga.catalog.db.mongodb.iterators
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.AnnotableCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.BatchedCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.CatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.ClinicalAnalysisCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.CohortCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.FamilyCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.FileCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.IndividualCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.InterpretationCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.JobCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.OrganizationCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.ProjectCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.SampleCatalogMongoDBIterator
    org.opencb.opencga.catalog.db.mongodb.iterators.org.opencb.opencga.catalog.db.mongodb.iterators.StudyCatalogMongoDBIterator
    org.opencb.opencga.catalog.exceptions
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogAuditException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogAuthenticationException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogAuthorizationException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogDBException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogDBRuntimeException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogIOException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogParameterException
    org.opencb.opencga.catalog.exceptions.org.opencb.opencga.catalog.exceptions.CatalogRuntimeException
    org.opencb.opencga.catalog.io
    org.opencb.opencga.catalog.io.org.opencb.opencga.catalog.io.CatalogIOManager
    org.opencb.opencga.catalog.io.org.opencb.opencga.catalog.io.IOManager
    org.opencb.opencga.catalog.io.org.opencb.opencga.catalog.io.IOManagerFactory
    org.opencb.opencga.catalog.io.org.opencb.opencga.catalog.io.PosixIOManager
    org.opencb.opencga.catalog.managers
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.AbstractManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.AdminManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.AnnotationSetManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.AuditManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.CatalogManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.ClinicalAnalysisManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.CohortManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.FamilyManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.FileManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.FileUtils
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.IndividualManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.InterpretationManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.JobManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.MailManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.NoteManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.OrganizationManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.PanelManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.ProjectManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.ResourceManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.SampleManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.StudyManager
    org.opencb.opencga.catalog.managers.org.opencb.opencga.catalog.managers.UserManager
    org.opencb.opencga.catalog.migration
    org.opencb.opencga.catalog.migration.org.opencb.opencga.catalog.migration.Migration
    org.opencb.opencga.catalog.migration.org.opencb.opencga.catalog.migration.MigrationException
    org.opencb.opencga.catalog.migration.org.opencb.opencga.catalog.migration.MigrationManager
    org.opencb.opencga.catalog.migration.org.opencb.opencga.catalog.migration.MigrationRuntimeException
    org.opencb.opencga.catalog.migration.org.opencb.opencga.catalog.migration.MigrationSummary
    org.opencb.opencga.catalog.migration.org.opencb.opencga.catalog.migration.MigrationTool
    org.opencb.opencga.catalog.models
    org.opencb.opencga.catalog.models.org.opencb.opencga.catalog.models.ClinicalAnalysisLoadResult
    org.opencb.opencga.catalog.models.org.opencb.opencga.catalog.models.InternalGetDataResult
    org.opencb.opencga.catalog.old.models.tool
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Acl
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Author
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.ConfigAttr
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Example
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.ExampleOption
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Execution
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Icon
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.InputParam
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Manifest
    org.opencb.opencga.catalog.old.models.tool.org.opencb.opencga.catalog.old.models.tool.Option
    org.opencb.opencga.catalog.templates
    org.opencb.opencga.catalog.templates.org.opencb.opencga.catalog.templates.TemplateEntryIterator
    org.opencb.opencga.catalog.templates.org.opencb.opencga.catalog.templates.TemplateManager
    org.opencb.opencga.catalog.templates.config
    org.opencb.opencga.catalog.templates.config.org.opencb.opencga.catalog.templates.config.TemplateConfiguration
    org.opencb.opencga.catalog.templates.config.org.opencb.opencga.catalog.templates.config.TemplateFile
    org.opencb.opencga.catalog.templates.config.org.opencb.opencga.catalog.templates.config.TemplateManifest
    org.opencb.opencga.catalog.templates.config.org.opencb.opencga.catalog.templates.config.TemplateProject
    org.opencb.opencga.catalog.templates.config.org.opencb.opencga.catalog.templates.config.TemplateStudy
    org.opencb.opencga.catalog.utils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.AnnotationUtils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.AvroToAnnotationConverter
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.CatalogDemo
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.CatalogFqn
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.CatalogSampleAnnotationsLoader
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.Constants
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.FileMetadataReader
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.FileScanner
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.FqnUtils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.InterpretationUtils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.JwtUtils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.ParamUtils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.PedigreeGraphUtils
    org.opencb.opencga.catalog.utils.org.opencb.opencga.catalog.utils.UuidUtils
    variablesets
    variablesets.variablesets.cohort-variant-stats-variableset.json
    variablesets.variablesets.sample-variant-stats-variableset.json




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