All Downloads are FREE. Search and download functionalities are using the official Maven repository.
  • Log In
  • Register
    • Search JAR files by class name

    Download hadoop-bam JAR 7.3.1 with all dependencies


    A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.

    Files of the artifact hadoop-bam version 7.3.1 from the group org.seqdoop.

    Test

    Download hadoop-bam (7.3.1)
    Artifact hadoop-bam
    Group org.seqdoop
    Version 7.3.1
    Last update 20. January 2016
    Organization not specified
    URL http://sourceforge.net/projects/hadoop-bam/
    License MIT-License
    Dependencies amount 3
    Dependencies hadoop-client, htsjdk, jsr203hadoop,
    There are maybe transitive dependencies!
    There is a newer version: 7.10.0
    Show newest version
    Show more of this group  Show more artifacts with this name
    Show all versions of hadoop-bam Show documentation

    Please rate this JAR file. Is it a good library?

    1 downloads

    Source code of hadoop-bam version 7.3.1

    META-INF
    META-INF.META-INF.MANIFEST.MF
    META-INF.services
    META-INF.services.META-INF.services.org.seqdoop.hadoop_bam.cli.CLIPlugin
    hadoop.org.apache.hadoop.mapreduce.lib.output
    hadoop.org.apache.hadoop.mapreduce.lib.output.hadoop.org.apache.hadoop.mapreduce.lib.output.MultipleOutputs
    hadoop.org.apache.hadoop.mapreduce.lib.partition
    hadoop.org.apache.hadoop.mapreduce.lib.partition.hadoop.org.apache.hadoop.mapreduce.lib.partition.InputSampler
    hadoop.org.apache.hadoop.mapreduce.lib.partition.hadoop.org.apache.hadoop.mapreduce.lib.partition.TotalOrderPartitioner
    hbparquet.hadoop.util
    hbparquet.hadoop.util.hbparquet.hadoop.util.ContextUtil
    org.seqdoop.hadoop_bam
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.AnySAMInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.AnySAMOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BAMInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BAMOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BAMRecordReader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BAMRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BAMSplitGuesser
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BCFRecordReader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BCFRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.BCFSplitGuesser
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.CRAMInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.CRAMRecordReader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.FastaInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.FastqInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.FastqOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.FileVirtualSplit
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.FormatConstants
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.FormatException
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringAnySAMOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringBAMOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringBAMRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringBCFRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringSAMRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringVCFOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.KeyIgnoringVCFRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.LazyBAMRecordFactory
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.LazyBCFGenotypesContext
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.LazyParsingGenotypesContext
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.LazyVCFGenotypesContext
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.LineReader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.QseqInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.QseqOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.ReferenceFragment
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SAMFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SAMInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SAMRecordReader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SAMRecordWritable
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SAMRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SequencedFragment
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SplittingBAMIndex
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.SplittingBAMIndexer
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VCFFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VCFInputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VCFOutputFormat
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VCFRecordReader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VCFRecordWriter
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VariantContextCodec
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VariantContextWithHeader
    org.seqdoop.hadoop_bam.org.seqdoop.hadoop_bam.VariantContextWritable
    org.seqdoop.hadoop_bam.cli
    org.seqdoop.hadoop_bam.cli.org.seqdoop.hadoop_bam.cli.CLIMRBAMPlugin
    org.seqdoop.hadoop_bam.cli.org.seqdoop.hadoop_bam.cli.CLIMRPlugin
    org.seqdoop.hadoop_bam.cli.org.seqdoop.hadoop_bam.cli.CLIMergingAnySAMOutputFormat
    org.seqdoop.hadoop_bam.cli.org.seqdoop.hadoop_bam.cli.CLIPlugin
    org.seqdoop.hadoop_bam.cli.org.seqdoop.hadoop_bam.cli.Frontend
    org.seqdoop.hadoop_bam.cli.org.seqdoop.hadoop_bam.cli.Utils
    org.seqdoop.hadoop_bam.cli.plugins
    org.seqdoop.hadoop_bam.cli.plugins.org.seqdoop.hadoop_bam.cli.plugins.Cat
    org.seqdoop.hadoop_bam.cli.plugins.org.seqdoop.hadoop_bam.cli.plugins.FixMate
    org.seqdoop.hadoop_bam.cli.plugins.org.seqdoop.hadoop_bam.cli.plugins.Index
    org.seqdoop.hadoop_bam.cli.plugins.org.seqdoop.hadoop_bam.cli.plugins.Sort
    org.seqdoop.hadoop_bam.cli.plugins.org.seqdoop.hadoop_bam.cli.plugins.VCFSort
    org.seqdoop.hadoop_bam.cli.plugins.org.seqdoop.hadoop_bam.cli.plugins.View
    org.seqdoop.hadoop_bam.cli.plugins.chipster
    org.seqdoop.hadoop_bam.cli.plugins.chipster.org.seqdoop.hadoop_bam.cli.plugins.chipster.Summarize
    org.seqdoop.hadoop_bam.cli.plugins.chipster.org.seqdoop.hadoop_bam.cli.plugins.chipster.SummarySort
    org.seqdoop.hadoop_bam.custom.jargs.gnu
    org.seqdoop.hadoop_bam.custom.jargs.gnu.org.seqdoop.hadoop_bam.custom.jargs.gnu.CmdLineParser
    org.seqdoop.hadoop_bam.custom.jargs.gnu.org.seqdoop.hadoop_bam.custom.jargs.gnu.LICENCE
    org.seqdoop.hadoop_bam.util
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.BGZFBlockIndex
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.BGZFBlockIndexer
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.BGZFSplitFileInputFormat
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.BGZFSplitGuesser
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.ConfHelper
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.DataInputWrapper
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.DataOutputWrapper
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.GetSortedBAMHeader
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.MurmurHash3
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.Pair
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.SAMHeaderReader
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.SAMOutputPreparer
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.SeekableArrayStream
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.Timer
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.VCFHeaderReader
    org.seqdoop.hadoop_bam.util.org.seqdoop.hadoop_bam.util.WrapSeekable




    © 2015 - 2025 Weber Informatics LLC | Privacy Policy