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jcore-mutationfinder-ae from group de.julielab (version 2.6.1)

An analysis engine to recognize mentions of gene point mutations in document text. This is a wrapper around the original MutationFinder (http://mutationfinder.sourceforge.net/), published in the following paper: MutationFinder: A high-performance system for extracting point mutation mentions from text J. Gregory Caporaso, William A. Baumgartner Jr., David A. Randolph, K. Bretonnel Cohen, and Lawrence Hunter; Bioinformatics, 2007 23(14):1862-1865; doi:10.1093/bioinformatics/btm235;

Group: de.julielab Artifact: jcore-mutationfinder-ae
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Artifact jcore-mutationfinder-ae
Group de.julielab
Version 2.6.1
Last update 18. December 2022
Organization not specified
URL Not specified
License BSD-2-Clause
Dependencies amount 6
Dependencies oro, junit-jupiter-engine, jcore-types, jcore-descriptor-creator, slf4j-api, assertj-core,
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mone-article-experiments from group org.cicirello (version 1.0.0)

This package contains Java programs for reproducing the experiments, and analysis of experimental data, from the following article: Cicirello, V.A. On Fitness Landscape Analysis of Permutation Problems: From Distance Metrics to Mutation Operator Selection. Mobile Networks and Applications (2022). https://doi.org/10.1007/s11036-022-02060-z.

Group: org.cicirello Artifact: mone-article-experiments
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Artifact mone-article-experiments
Group org.cicirello
Version 1.0.0
Last update 09. November 2022
Organization Cicirello.Org
URL https://github.com/cicirello/MONE2022-experiments
License GPL-3.0-or-later
Dependencies amount 0
Dependencies No dependencies
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moa-kafka from group nz.ac.waikato.cms.adams (version 2022.10.17)

Massive On-line Analysis is an environment for massive data mining. MOA provides a framework for data stream mining and includes tools for evaluation and a collection of machine learning algorithms. Related to the WEKA project, also written in Java, while scaling to more demanding problems. This artifact enables you to stream data to MOA from Kafka.

Group: nz.ac.waikato.cms.adams Artifact: moa-kafka
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Artifact moa-kafka
Group nz.ac.waikato.cms.adams
Version 2022.10.17
Last update 17. October 2022
Organization University of Waikato, Hamilton, NZ
URL http://moa.cms.waikato.ac.nz/
License GNU General Public License 3
Dependencies amount 2
Dependencies moa, kafka-clients,
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weka-package from group nz.ac.waikato.cms.adams (version 2022.10.17)

Group: nz.ac.waikato.cms.adams Artifact: weka-package
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Artifact weka-package
Group nz.ac.waikato.cms.adams
Version 2022.10.17
Last update 17. October 2022
Organization University of Waikato, Hamilton, NZ
URL http://moa.cms.waikato.ac.nz/
License GNU General Public License 3
Dependencies amount 1
Dependencies moa,
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moa from group nz.ac.waikato.cms.adams (version 2022.10.17)

Group: nz.ac.waikato.cms.adams Artifact: moa
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Artifact moa
Group nz.ac.waikato.cms.adams
Version 2022.10.17
Last update 17. October 2022
Organization University of Waikato, Hamilton, NZ
URL http://moa.cms.waikato.ac.nz/
License GNU General Public License 3.0
Dependencies amount 16
Dependencies weka-dev, sizeofag, guava, jclasslocator, jshell-scripting, meka, commons-math3, opencsv, commons-cli, commons-io, jfreechart, gson, ssj, JMathPlot, JMathIO, slf4j-log4j12,
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moa-pom from group nz.ac.waikato.cms.adams (version 2022.10.17)

Group: nz.ac.waikato.cms.adams Artifact: moa-pom

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Artifact moa-pom
Group nz.ac.waikato.cms.adams
Version 2022.10.17
Last update 17. October 2022
Organization University of Waikato, Hamilton, NZ
URL http://moa.cms.waikato.ac.nz/
License GNU General Public License 3.0
Dependencies amount 0
Dependencies No dependencies
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cycle-mutation-experiments from group org.cicirello (version 1.0.0)

This package contains Java programs for reproducing the experiments, and analysis of experimental data, from the following article: Vincent A. Cicirello. 2022. Cycle Mutation: Evolving Permutations via Cycle Induction. Applied Sciences, 12, 11, Article 5506 (June 2022). https://doi.org/10.3390/app12115506. Also available at: https://www.cicirello.org/publications/applsci-12-05506.pdf

Group: org.cicirello Artifact: cycle-mutation-experiments
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Artifact cycle-mutation-experiments
Group org.cicirello
Version 1.0.0
Last update 30. May 2022
Organization Cicirello.Org
URL https://github.com/cicirello/cycle-mutation-experiments
License GPL-3.0-or-later
Dependencies amount 0
Dependencies No dependencies
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threadfix-ham from group com.github.secdec.astam-correlator (version 1.3.8)

HAM stands for Hybrid Analysis Mapping. The module originated in research done for DHS to improve static-to-dynamic vulnerabilty matching. It is now a generalized system primarily for parsing source code into Endpoint objects and performing lookups based on partial information. This code is most easily accessed by creating an EndpointDatabase with EndpointDatabaseFactory.getDatabase. The database can be searched using queries created with EndpointQueryBuilder.

Group: com.github.secdec.astam-correlator Artifact: threadfix-ham
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Artifact threadfix-ham
Group com.github.secdec.astam-correlator
Version 1.3.8
Last update 15. March 2022
Organization not specified
URL Not specified
License not specified
Dependencies amount 3
Dependencies commons-io, threadfix-entities, jsoup,
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camunda-kafka-model from group de.viadee.camunda (version 2.0.1)

A small Java-based toolset to gather event data from a Camunda BPM engine and store it in Apache Kafka. Repository contains the camunda-kafka-polling-client and the camunda-kafka-model, to make reuse of the data structures easy. This tooling is meant to be used as a part of the viadee Process Warehouse or the bpmn.ai concepts. This is the model module, i.e. it contains the data model classes for reuse by Java-based, downstream analysis components.

Group: de.viadee.camunda Artifact: camunda-kafka-model
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Artifact camunda-kafka-model
Group de.viadee.camunda
Version 2.0.1
Last update 18. February 2022
Organization viadee Unternehmensberatung AG
URL https://github.com/viadee/camunda-kafka-polling-client
License BSD-3 Clause
Dependencies amount 1
Dependencies jackson-annotations,
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aggregation-log-filter-logback from group com.axibase (version 3.2.1)

The filter plugs into the logging pipeline and measures number of log events at each trace level. These counters can be used to monitor error levels for the entire application and for individual loggers. The filter can be also configured to send a subset of log events into a backend storage system such as Axibase Time-Series Database to facilitate root-cause analysis.

Group: com.axibase Artifact: aggregation-log-filter-logback
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Artifact aggregation-log-filter-logback
Group com.axibase
Version 3.2.1
Last update 27. December 2021
Organization not specified
URL https://github.com/axibase/aggregation-log-filter/aggregation-log-filter-logback
License Apache License, Version 2.0
Dependencies amount 4
Dependencies aggregation-log-filter-core, slf4j-api, jul-to-slf4j, logback-classic,
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