Download JAR files tagged by paxtools with all dependencies

paxtools-console from group org.biopax.paxtools (version 5.3.0)

Paxtools Console Application and Examples

Group: org.biopax.paxtools Artifact: paxtools-console
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Artifact paxtools-console
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 10
Dependencies paxtools-core, psimi-converter, gsea-converter, sbgn-converter, paxtools-query, pattern, normalizer, fluent-hc, httpmime, json-simple,
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paxtools-trove from group org.biopax.paxtools (version 5.2.1)

A Trove4j based java collections provider for the paxtools-core BioPAX model.

Group: org.biopax.paxtools Artifact: paxtools-trove
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Artifact paxtools-trove
Group org.biopax.paxtools
Version 5.2.1
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, trove4j,
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paxtools-archetype from group org.biopax.paxtools (version 5.3.0)

Paxtools Maven archetype - sample Java project to quickly start using Paxtools library and BioPAX data.

Group: org.biopax.paxtools Artifact: paxtools-archetype
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Artifact paxtools-archetype
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 0
Dependencies No dependencies
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sif-converter from group org.biopax.paxtools (version 4.3.1)

Converts a BioPAX model to binary SIF (simple interaction format) or extended binary SIF by inferring the interactions in the model and describing them in terms of simple interactions. This includes a set of BioPAX-specific inference rules implemented on top of paxtools-core.

Group: org.biopax.paxtools Artifact: sif-converter
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Artifact sif-converter
Group org.biopax.paxtools
Version 4.3.1
Last update 22. September 2015
Organization not specified
URL http://biopax.github.io/Paxtools
License not specified
Dependencies amount 1
Dependencies paxtools-core,
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paxtools-core from group org.biopax.paxtools (version 5.3.0)

Paxtools core library includes the BioPAX object model and interfaces, the default implementation and extras: reflection-based class factories and property editors/accessors, some inverse properties (e.g., xrefOf, componentOf), traversal and file (I/O) utilities.

Group: org.biopax.paxtools Artifact: paxtools-core
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Artifact paxtools-core
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies collections-generic, commons-lang3,
There are maybe transitive dependencies!

paxtools from group org.biopax.paxtools (version 5.3.0)

Paxtools is a Java library that allows software to read, write, analyze and manipulate BioPAX models. Paxtools provide a consistent, fully implemented, validating BioPAX API that significantly reduces development time of oftware that require programmatic access to BioPAX. Paxtools is modular, lightweight and platform independent to be easily embedded into applications.

Group: org.biopax.paxtools Artifact: paxtools
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Artifact paxtools
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization BioPAX
URL https://biopax.github.io/Paxtools
License MIT license
Dependencies amount 4
Dependencies slf4j-api, jaxb-api, jaxb-core, jaxb-impl,
There are maybe transitive dependencies!

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