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Signal from group se.lth.immun (version 1.0.1)

Code for data smoothing and signal processing. Intended for mass spectrometry proteomics application.

Group: se.lth.immun Artifact: Signal
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Download Signal.jar (1.0.1)
 

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Artifact Signal
Group se.lth.immun
Version 1.0.1
Last update 19. May 2016
Organization not specified
URL https://github.com/fickludd/proteomicore
License The Apache License, Version 2.0
Dependencies amount 2
Dependencies scala-library, commons-math3,
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proteomics from group net.sf.bioutils.proteomics (version 3.1.6)

Group: net.sf.bioutils.proteomics Artifact: proteomics
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Artifact proteomics
Group net.sf.bioutils.proteomics
Version 3.1.6


bioutils-proteomics from group net.sf.bioutils-proteo (version 2.3.1)

Lightweight framework for handling biological and bioinformatical data related to proteomics.

Group: net.sf.bioutils-proteo Artifact: bioutils-proteomics
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Download bioutils-proteomics.jar (2.3.1)
 

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Artifact bioutils-proteomics
Group net.sf.bioutils-proteo
Version 2.3.1
Last update 18. December 2012
Organization not specified
URL Not specified
License not specified
Dependencies amount 2
Dependencies jranges, kerner-utils-collections,
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Proteins from group se.lth.immun (version 1.3.3)

Group: se.lth.immun Artifact: Proteins
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Artifact Proteins
Group se.lth.immun
Version 1.3.3


analytica-lib from group uk.ac.liv.pgb (version 0.01)

Library allowing generation of plots and data from proteomics and metabolomics mass spectrometry data through the use of R and java methods.

Group: uk.ac.liv.pgb Artifact: analytica-lib
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Artifact analytica-lib
Group uk.ac.liv.pgb
Version 0.01
Last update 28. April 2016
Organization not specified
URL http://bitbucket.org/slurmclassic/analytica-lib
License not specified
Dependencies amount 2
Dependencies JRI, jmzquantml,
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pia from group io.github.bigbio.external (version 1.3.23)

Protein inference toolbox that contains algorithms to merge results from search engines in mass spectrometry and proteomics. It provides functionalities to compute FDR at different levels including PSM, peptide and Protein levels.

Group: io.github.bigbio.external Artifact: pia
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Download pia.jar (1.3.23)
 

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Artifact pia
Group io.github.bigbio.external
Version 1.3.23
Last update 02. December 2021
Organization Medizinisches Proteom-Center, Medical Bioinformatics
URL https://github.com/mpc-bioinformatics/pia
License BSD license
Dependencies amount 25
Dependencies lombok, picocli, commons-lang3, commons-collections4, jmzidentml, jaxb-api, jaxb-impl, jaxb-core, pride-mod, jmztab, px-submission-core, gson, pride-jaxb, fastutil, xxindex, mascotdatfile, xtandem-parser, biojava-ontology, BaseLib, CvtBaseLib, PDLibrary, sqlite4java, sqlite-jdbc, ehcache, utilities,
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maltcms-io-providers from group io.github.nilshoffmann (version 2.0.0)

Group: io.github.nilshoffmann Artifact: maltcms-io-providers
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Artifact maltcms-io-providers
Group io.github.nilshoffmann
Version 2.0.0
Last update 11. August 2023
Organization not specified
URL Not specified
License not specified
Dependencies amount 0
Dependencies No dependencies
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maltcms-distributions from group io.github.nilshoffmann (version 2.0.0)

Group: io.github.nilshoffmann Artifact: maltcms-distributions
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maltcms-modules from group io.github.nilshoffmann (version 2.0.0)

Group: io.github.nilshoffmann Artifact: maltcms-modules
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Artifact maltcms-modules
Group io.github.nilshoffmann
Version 2.0.0




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