Download biopax JAR files with dependency
parent from group org.biopax.validator (version 6.0.0)
The BioPAX Validator Project (including a general-purpose
object model validation and error reporting API core, OBO ontologies manager,
MIRIAM registry access (to resolve bio db names and identifiers), hundreds
BioPAX Level3 rules, settings, and the console and web applications)
Group: org.biopax.validator Artifact: parent
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Artifact parent
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization BioPAX.org
URL https://biopax.github.io/validator
License MIT
Dependencies amount 3
Dependencies javax.annotation-api, jakarta.activation-api, slf4j-api,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization BioPAX.org
URL https://biopax.github.io/validator
License MIT
Dependencies amount 3
Dependencies javax.annotation-api, jakarta.activation-api, slf4j-api,
There are maybe transitive dependencies!
paxtools from group org.biopax.paxtools (version 6.0.0)
Paxtools is a Java library that allows software to read, write, analyze and manipulate BioPAX models.
Paxtools provide a consistent, fully implemented, validating BioPAX API that significantly reduces development
time of oftware that require programmatic access to BioPAX. Paxtools is modular, lightweight and platform
independent to be easily embedded into applications.
Group: org.biopax.paxtools Artifact: paxtools
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Artifact paxtools
Group org.biopax.paxtools
Version 6.0.0
Last update 25. May 2024
Organization BioPAX
URL https://biopax.github.io/Paxtools
License MIT license
Dependencies amount 1
Dependencies slf4j-api,
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Group org.biopax.paxtools
Version 6.0.0
Last update 25. May 2024
Organization BioPAX
URL https://biopax.github.io/Paxtools
License MIT license
Dependencies amount 1
Dependencies slf4j-api,
There are maybe transitive dependencies!
biopax-validator from group org.biopax.validator (version 6.0.0)
BioPAX Semantic Rules and Best Practices validation
Group: org.biopax.validator Artifact: biopax-validator
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Artifact biopax-validator
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 9
Dependencies paxtools-core, normalizer, validator-core, spring-context-support, spring-oxm, commons-lang3, commons-text, spring-aop, spring-aspects,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 9
Dependencies paxtools-core, normalizer, validator-core, spring-context-support, spring-oxm, commons-lang3, commons-text, spring-aop, spring-aspects,
There are maybe transitive dependencies!
biopax-validator-web from group org.biopax.validator (version 4.0.0)
BioPAX Validator Web Application and Web Service
Group: org.biopax.validator Artifact: biopax-validator-web
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Artifact biopax-validator-web
Group org.biopax.validator
Version 4.0.0
Last update 14. September 2018
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 8
Dependencies biopax-validator, commons-beanutils, commons-digester, commons-collections, commons-fileupload, commons-io, spring-web, spring-webmvc,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 4.0.0
Last update 14. September 2018
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 8
Dependencies biopax-validator, commons-beanutils, commons-digester, commons-collections, commons-fileupload, commons-io, spring-web, spring-webmvc,
There are maybe transitive dependencies!
pattern from group org.biopax.paxtools (version 6.0.0)
BioPAX Pattern Search library. Also, converts BioPAX model to SIF (simple binary interactions) text format.
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Artifact pattern
Group org.biopax.paxtools
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, normalizer,
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Group org.biopax.paxtools
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 2
Dependencies paxtools-core, normalizer,
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normalizer from group org.biopax.paxtools (version 6.0.0)
BioPAX Model/URIs Normalizer and BIO Identifiers Resolver
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Artifact normalizer
Group org.biopax.paxtools
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies paxtools-core, jackson-databind, lombok,
There are maybe transitive dependencies!
Group org.biopax.paxtools
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 3
Dependencies paxtools-core, jackson-databind, lombok,
There are maybe transitive dependencies!
paxtools-archetype from group org.biopax.paxtools (version 5.3.0)
Paxtools Maven archetype - sample Java project to quickly start using Paxtools library and BioPAX data.
Artifact paxtools-archetype
Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 0
Dependencies No dependencies
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Group org.biopax.paxtools
Version 5.3.0
Last update 06. August 2023
Organization not specified
URL https://biopax.github.io/Paxtools
License not specified
Dependencies amount 0
Dependencies No dependencies
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biopax-validator-client from group org.biopax.validator (version 6.0.0)
An example client for the biopax-validator
Group: org.biopax.validator Artifact: biopax-validator-client
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Artifact biopax-validator-client
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 3
Dependencies fluent-hc, httpmime, jakarta.xml.bind-api,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 3
Dependencies fluent-hc, httpmime, jakarta.xml.bind-api,
There are maybe transitive dependencies!
obo-fetcher from group org.biopax.validator (version 6.0.0)
OBO ontology access and handling (derived from EBI PSIDEV Ontology Manager and OLS)
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Artifact obo-fetcher
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 4
Dependencies obo, bbop, oscache, spring-core,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 4
Dependencies obo, bbop, oscache, spring-core,
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validator-core from group org.biopax.validator (version 6.0.0)
Object model validation and reporting library
Group: org.biopax.validator Artifact: validator-core
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Artifact validator-core
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 3
Dependencies obo-fetcher, commons-text, jakarta.xml.bind-api,
There are maybe transitive dependencies!
Group org.biopax.validator
Version 6.0.0
Last update 25. May 2024
Organization not specified
URL https://biopax.github.io/validator
License not specified
Dependencies amount 3
Dependencies obo-fetcher, commons-text, jakarta.xml.bind-api,
There are maybe transitive dependencies!
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