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MassBank of America (MoNA), is an auto curating repository for storing, comparing and querying mass spectra of chemical compounds. It is metadata centric and it was designed to allow easy integration into other tools by utilize its REST based application programming interface. At the current time it contains over 200k predicted and 40k unique experimental mass spectra and their associated metadata. The predicted spectra were obtained by utilizing the lipid blast library and the experimental spectra were acquired from 30 different facilities all over the world, including several major research facilities in the United States and Japan. MoNA is utilizing the InChI Key as unique identifier for chemicals and is designed for easy scalability and expendability. This is realized by utilizing common applications like nginx, grails, AngularJS, postgresSQL and tomcat. MoNA is currently integrated in applications like MSDial, BinBase, MZMine and the statistics package R. This was accomplished by utilizing its REST based API, which is also utilized by its main AngularJS based web interface. We consider MoNA to be highly useful for crosslinking mass spectra in publications, identification of unknowns and integration in data acquisition software. This package provides you with access to the REST api of the main MoNA installation.

EasyConfig provides simple way to overview and apply settings to file or folder based collections of files. Synonyms to "setting" are property, attribute, value while throughout application "setting" is used. The settings are groupped in "configuration" that is collection of settings from various sources. Main design concepts are: * minimalistic way to describe configuration * pluggable support for data types (validation), setting sources, source handlers Sample use case: An application is deployed in multiple locations. We need to quickly check key settings/parameters and optionally modify some of them. These values are located in different places: - in files directly in file structure - in files inside archive files (optionally nested archives) - values in DB tables - values accessible via URLs - other sources (just guessed: SSH/telnet connection+some command(s), UPnP devices, proprietary protocols, etc) We gather info from any supported (extendable) source and can modify and apply changes if supported by source (e.g. we can't update value that is count of rows in DB table, but we can read that value).

DICTIONARY-BASED COMPOUND SPLITTER FOR GERMAN BananaSplit is a compound splitter for German that uses a dictionary resource. The dictionary can be either a simple word list, or a word list equipped with POS values, or an XML based dictionary. The original version was able to use GermaNet as a dictionary. This is useful in applications that rely on GermaNet anyway: no additional lexicon needs to be generated and held in memory. This was also the original purpose of BananaSplit. It served as a compound splitter for a tool called BananaRelation. BananaRelation cannot be published here as it makes heavy use of unpublished code by EML Research, Heidelberg. BananaSplit can either be used as a standalone application or it can be integrated into other Java programs (as a library). This program emerged from the seminar Lexical Semantic Processing in NLP (winter term 2005/2006) taught by Iryna Gurevych at the Seminar für Sprachwissenschaft, Tübingen. Both BananaSplit and BananaRelation were introduced to the seminar participants on 17th of December, 2005. The key algorithm for compound splitting is based on Langer (1998). The program came to use in Müller and Gurevych (2006). Please note that the program splits compounds into two parts only. Details are given in the documents linked below.

Races the cross validation error of competing attribute subsets. Use in conjuction with a ClassifierSubsetEval. RaceSearch has four modes: forward selection races all single attribute additions to a base set (initially no attributes), selects the winner to become the new base set and then iterates until there is no improvement over the base set. Backward elimination is similar but the initial base set has all attributes included and races all single attribute deletions. Schemata search is a bit different. Each iteration a series of races are run in parallel. Each race in a set determines whether a particular attribute should be included or not---ie the race is between the attribute being "in" or "out". The other attributes for this race are included or excluded randomly at each point in the evaluation. As soon as one race has a clear winner (ie it has been decided whether a particular attribute should be inor not) then the next set of races begins, using the result of the winning race from the previous iteration as new base set. Rank race first ranks the attributes using an attribute evaluator and then races the ranking. The race includes no attributes, the top ranked attribute, the top two attributes, the top three attributes, etc. It is also possible to generate a raked list of attributes through the forward racing process. If generateRanking is set to true then a complete forward race will be run---that is, racing continues until all attributes have been selected. The order that they are added in determines a complete ranking of all the attributes. Racing uses paired and unpaired t-tests on cross-validation errors of competing subsets. When there is a significant difference between the means of the errors of two competing subsets then the poorer of the two can be eliminated from the race. Similarly, if there is no significant difference between the mean errors of two competing subsets and they are within some threshold of each other, then one can be eliminated from the race.

JUNG the Java Universal Network/Graph Framework--is a software library that provides a common and extendible language for the modeling, analysis, and visualization of data that can be represented as a graph or network. It is written in Java, which allows JUNG-based applications to make use of the extensive built-in capabilities of the Java API, as well as those of other existing third-party Java libraries. The JUNG architecture is designed to support a variety of representations of entities and their relations, such as directed and undirected graphs, multi-modal graphs, graphs with parallel edges, and hypergraphs. It provides a mechanism for annotating graphs, entities, and relations with metadata. This facilitates the creation of analytic tools for complex data sets that can examine the relations between entities as well as the metadata attached to each entity and relation. The current distribution of JUNG includes implementations of a number of algorithms from graph theory, data mining, and social network analysis, such as routines for clustering, decomposition, optimization, random graph generation, statistical analysis, and calculation of network distances, flows, and importance measures (centrality, PageRank, HITS, etc.). JUNG also provides a visualization framework that makes it easy to construct tools for the interactive exploration of network data. Users can use one of the layout algorithms provided, or use the framework to create their own custom layouts. In addition, filtering mechanisms are provided which allow users to focus their attention, or their algorithms, on specific portions of the graph.

This project aims to offer an easy-to-extend Java DAS server framework. It offers several advantages: * Implementing data sources is very easy but also flexible and powerful. * Data caching is built into the system, with access to the caching mechanism made available to the data sources. * All aspects of the server are highly configurable, including selecting options where the DAS 1.53 specification offers choices to the implementor. * The latest Java technologies have been used throughout the system to optimise performance and simplify data source development. * Wherever possible the same terminology is used in the API as in the DAS specification and XML - again, making data source development more easy. * The server allows XSLT transforms of the DAS XML to be configured to provide a simple DAS client view (limited to the single DAS source). More details of the DAS protocol, DAS servers and DAS clients can be found at http://www.biodas.org/wiki/Main_Page. The first version of this server is a complete implementation of Distributed Sequence Annotation System (DAS) Version 1.53. If you are interested in learning more about DAS 1.53, the specification is highly recommended as a concise and complete description of the DAS protocol that can be obtained from: http://biodas.org/documents/spec.html

The Video SDKs are app development kits provided to enrich apps with video collaboration features to connect customers and communities. Use these SDKs to build apps with highly customized user interfaces along with access to raw video and audio data. Video SDKs are designed to be: * Easy to use: Import libraries, call required functions, and all video conferencing will be handled for you. * Lightweight: Video SDKs are streamlined toolkits with an enormous reduction in size compared to Meeting SDKs with all the power of Zoom's video and audio solutions. * Highly customizable: Raw video and audio data is available to you, allowing your chosen renderer to customize the video experience. Video sessions created by the Video SDKs are launched instantly, bringing a delightful video communication experience to your users with high-quality video and audio. Direct access to raw video and audio data allows improved interaction between users and the app video stream. Imagine a gaming video streaming app with direct interaction between the player and viewers based on in-game events or prompts from the community. Or, imagine an AR streaming platform with direct viewer access to the on-screen video. As with our Meeting SDKs, Video SDKs allow screen-sharing from devices, in-session chat messages, and high-quality video and audio streams similar to Zoom's core capabilities. The Video SDKs enable the following functionality in your app: * Launch a video communication session instantly * Share screen directly from your device * Send instant chat messages during the session * Capture and review raw data locally * Test different rendering schema and enjoy high-quality video and audio streams * Broadcast the video session to third-party live streaming providers To know more, see: https://developers.zoom.us/docs/video-sdk/

The Video SDKs are app development kits provided to enrich apps with video collaboration features to connect customers and communities. Use these SDKs to build apps with highly customized user interfaces along with access to raw video and audio data. Video SDKs are designed to be: * Easy to use: Import libraries, call required functions, and all video conferencing will be handled for you. * Lightweight: Video SDKs are streamlined toolkits with an enormous reduction in size compared to Meeting SDKs with all the power of Zoom's video and audio solutions. * Highly customizable: Raw video and audio data is available to you, allowing your chosen renderer to customize the video experience. Video sessions created by the Video SDKs are launched instantly, bringing a delightful video communication experience to your users with high-quality video and audio. Direct access to raw video and audio data allows improved interaction between users and the app video stream. Imagine a gaming video streaming app with direct interaction between the player and viewers based on in-game events or prompts from the community. Or, imagine an AR streaming platform with direct viewer access to the on-screen video. As with our Meeting SDKs, Video SDKs allow screen-sharing from devices, in-session chat messages, and high-quality video and audio streams similar to Zoom's core capabilities. The Video SDKs enable the following functionality in your app: * Launch a video communication session instantly * Share screen directly from your device * Send instant chat messages during the session * Capture and review raw data locally * Test different rendering schema and enjoy high-quality video and audio streams * Broadcast the video session to third-party live streaming providers To know more, see: https://developers.zoom.us/docs/video-sdk/

We have deprecated ZoomVideoSDK maven repository. Since Video SDK features have been modularized, we are deprecating this repository and publishing new releases into the following repositories. See the feature libraries documentation for details. ZoomVideoSDK Core — core Video SDK features: https://mvnrepository.com/artifact/us.zoom.videosdk/zoomvideosdk-core ZoomVideoSDK Annotation — Screen share annotation feature: https://mvnrepository.com/artifact/us.zoom.videosdk/zoomvideosdk-annotation ZoomVideoSDK Videoeffects — Virtual background feature: https://mvnrepository.com/artifact/us.zoom.videosdk/zoomvideosdk-videoeffects The Video SDKs are app development kits provided to enrich apps with video collaboration features to connect customers and communities. Use these SDKs to build apps with highly customized user interfaces along with access to raw video and audio data. Video SDKs are designed to be: * Easy to use: Import libraries, call required functions, and all video conferencing will be handled for you. * Lightweight: Video SDKs are streamlined toolkits with an enormous reduction in size compared to Meeting SDKs with all the power of Zoom's video and audio solutions. * Highly customizable: Raw video and audio data is available to you, allowing your chosen renderer to customize the video experience. Video sessions created by the Video SDKs are launched instantly, bringing a delightful video communication experience to your users with high-quality video and audio. Direct access to raw video and audio data allows improved interaction between users and the app video stream. Imagine a gaming video streaming app with direct interaction between the player and viewers based on in-game events or prompts from the community. Or, imagine an AR streaming platform with direct viewer access to the on-screen video. As with our Meeting SDKs, Video SDKs allow screen-sharing from devices, in-session chat messages, and high-quality video and audio streams similar to Zoom's core capabilities. The Video SDKs enable the following functionality in your app: * Launch a video communication session instantly * Share screen directly from your device * Send instant chat messages during the session * Capture and review raw data locally * Test different rendering schema and enjoy high-quality video and audio streams * Broadcast the video session to third-party live streaming providers To know more, see: https://developers.zoom.us/docs/video-sdk/